Jatropha curcas (Barbados nut): 105641907
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Entry
105641907 CDS
T03922
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105641907
03036 Chromosome and associated proteins [BR:
jcu03036
]
105641907
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105641907
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105641907
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HHH_9
Spt6_S1
HTH_44
HHH_3
Tex_N
SH2
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
105641907
NCBI-ProteinID:
XP_037496812
LinkDB
All DBs
Position
Unknown
AA seq
1606 aa
AA seq
DB search
MGKNVVSDEEDEVELEDEEREPVDADAIDDGEDDEEDEEGQDEYEKDDFIVDDVEEEEVD
EEEERADSDEERHKKRKKKKKRESEDVLDEDDYELLRDNNAFHHRPKDSKKFKRLKKAQR
DSDEERFGLSDEEFDGSGKSGRTAEEKLKRSLFGDDEGVPLEDIAEEEQAEEEEDGDIGE
EDEMADFIVDEEVDENGAPMRRKKLKRKKSRQAPGVTSSAIQEAQELFGDVDDFLLRRKQ
ELESSEWKETRLDREFEPTVLSEKYMTEKDEQIRVTDIPERMQISEESTGPPPTDDDSIS
DESNWIYNQLASGMLPFFRQRRAELSEEEQDDGPLNRDDISRFLELHHVQKLDVPFIAMY
RKEECSSLLKDPEPQDGDDENHDKSDCNSMLKWHKVLWGIQDLDKKWLLLQKRKTALYSY
YNKRFEEESRRIYDETRLNLNQQLFDSILKSLKAAESEREIDDVDAKFNLHFPPGEVGVD
EGQYKRPKRKSLYSVCSKAGLWEVANKFGCSAEQLGMSLSLEKIGYIWENAKETPEEIAS
NFTCAMFETPQAVLKGARHMAAVEISCEPSIRKYVRAMYMENAVVSTTPTPDGNAAIDSF
HQFAGVKWLREKPMNKFEDAQWLLIQKAEEEKLLQVTFKLPEKYMNKLIGEFDEHYLSDG
VSKSAQLWNEQRTLILKDALQIFLLPSMEKEARSLLTSRAKNWLIWEYGKVLWNKVSVSP
YQRKETDVSPDDEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYAGSLSSRSQNINDQ
QQKKRDQQLVLKFMTDHQPHVVVLGAVNLSCVKLRDDIYEIIFKMVEENPRDVGHEMDEL
SIVYGDESLSRLYENSRISSDQLAGQPGIVRRAAALGRYLQNPLAMVATLCGPAREILSW
KLSPLENFLTPDEKYAMVEQVMVDVTNQVGLDINMATSHEWLFAPLQFISGLGPRKAASL
QRSLVRAGAIFTRKDFVTVHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPE
SYGLAQEMAKDVYEMDNGDANDDDEALEMAIEHVRDRPSLLKTIDLNVYLKDKKRENKKE
TFKDIKGELIHGFQDWRKPYKEPSQDEEFYMISGETEDTLAEGRIVQATVRRVQGLRATC
ALESGLTGMLSREDYADDWRDISELSDRLHEGDILTCKIKSIQKNRYQVFLVCRDSEMRN
DRYQQIRNLDPYYREDRSTIQSEQEKARKEKELAKKHFKPRMIVHPRFQNITADEAMEIL
SDKDPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDISEGGKEHKDITSLLRIGKTLKIGD
DTFEDLDEVMDRYVDPLVSHLKAMLSYRKFRTGTKAEVDEQLRVEKSDYPTRIVYSFGIS
HEHPGTFILTYIRSTNPHHEYVGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPVHESTPS
IRSVAAMVPMRSPATGGSSGSSMGSGWGGSTNDGGWRSQSFDRDRSSGPGSRTGRNDYRN
GGSRDSHQSGLPRPYGGRGHGRGSYNNRGNDRQDSGYDNNSRWDSSAKDGDPGWGSFPGA
KVQNSPGKEAFPGGWGSGGTDTGNSGWGSGFKRGSSGGGGGGGGGG
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaacgtagtctctgatgaagaagatgaggtcgagcttgaagacgaggagaga
gaacctgtagacgctgatgcgattgacgatggtgaagatgatgaggaggacgaagaagga
caggacgaatatgaaaaggatgattttatagttgatgatgttgaagaggaagaagtagat
gaagaagaagagagggctgacagtgatgaagaaaggcacaagaaaaggaagaaaaagaaa
aaaagagagtctgaggatgtcctcgatgaagatgattatgaactccttcgagacaataat
gctttccaccaccgaccgaaggatagtaaaaagttcaagaggttaaaaaaggctcaaaga
gattctgatgaagagcgcttcgggctttctgatgaggagtttgatggaagtggtaaaagt
gggcgtactgctgaggagaaacttaagcgcagcttgtttggtgatgatgaaggagtacct
cttgaggatattgctgaagaggagcaggcagaagaggaagaggatggagacattggcgag
gaggatgaaatggcagactttattgtggatgaagaagttgatgagaatggagctccaatg
agacggaaaaaactcaagagaaagaaatctaggcaggcaccaggagttacatcttctgct
atacaggaagctcaggaactatttggtgatgttgatgacttcttactccgacgcaaacaa
gagttagaatctagtgaatggaaggaaactagattggatagggaatttgaaccaactgtt
ctctcggagaaatatatgactgagaaagatgagcaaattcgggtgactgatattccagaa
agaatgcagatctctgaggagagcactggtcctcctccaacagatgatgacagtatatca
gatgagagcaactggatatataatcagcttgctagtggtatgttacctttctttcgccaa
agaagagccgagttgagtgaagaagagcaggatgatggtcctttaaacagggacgacatt
agccgatttttagagttgcaccatgtgcagaagttagacgttccattcattgctatgtat
cggaaggaggagtgttcaagtctgctgaaagatcctgagccacaagatggtgatgatgag
aaccatgacaaatctgactgcaattctatgctgaagtggcacaaggtgctttggggaatt
caggacttggataaaaagtggttacttcttcaaaaacgaaagactgctctctattcttac
tataataaacgatttgaagaagaatcccgtcggatatatgatgagacgagactcaattta
aatcaacaactttttgattcaattcttaagtctctcaaggctgcagagtcggaaagagag
attgatgatgttgatgcaaagtttaacttgcatttccctcctggtgaggtgggtgttgat
gaaggacagtataagaggcccaagaggaaatcactatatagtgtctgtagtaaggctgga
ctatgggaagttgcaaacaagtttgggtgcagtgctgagcaacttggaatgtctttgtcc
ttagaaaagattgggtacatatgggaaaatgctaaggaaacaccagaggagattgcatcg
aactttacatgtgcaatgtttgaaactccccaagcagttcttaaaggggctagacacatg
gctgcggttgagataagttgtgagccaagtattaggaaatatgttcgcgctatgtatatg
gaaaatgctgtggtatccacaaccccaactccagatggaaatgctgcaatagattctttt
catcaatttgcaggtgtgaagtggttacgtgaaaagccaatgaacaaatttgaggatgct
caatggcttctaatccaaaaggctgaagaggagaagcttcttcaagtaacatttaagctt
cctgaaaaatatatgaataaattgattggtgaatttgatgagcattatctcagtgatggt
gttagtaaatctgctcagctctggaacgagcagaggacattgatactgaaggatgcactg
caaatttttttgttaccttcaatggagaaagaagcaagatccttattgacaagtagagca
aaaaactggttgatttgggaatacgggaaggttttgtggaataaagtttctgtgagtcca
tatcaacggaaagaaactgatgtttctccagatgatgaagctgcaccacgggtcatggca
tgctgttggggccctgggaagccagccacgacttttgttatgttagattcgtcaggggag
gtactagatgtactttacgctgggtctctttcctcgagatctcaaaacatcaatgaccag
caacagaagaaaagggaccagcaacttgttttgaagttcatgacggatcaccaaccgcat
gtagttgttctaggagctgtgaacttgtcttgtgtaaagctgagggatgatatttacgag
attatctttaagatggtggaggaaaatcctagagatgttggacatgagatggatgaatta
agcattgtatatggtgatgagtctctatcacgcctttatgaaaattctcggatttcttcc
gaccaactagctgggcagccaggcattgttaggcgggctgctgctcttggccgttatcta
cagaatccattggcaatggttgcaaccctttgtggaccagcaagggagattttgtcttgg
aagctcagccccttggagaactttcttactcctgatgagaaatatgcaatggttgaacag
gttatggtagatgtcacaaatcaggtgggccttgacattaatatggctaccagccatgaa
tggttatttgcccctttacaattcatttctgggctggggcctagaaaggcagcatccttg
cagaggtctctggtgagggctggagcaattttcactcgaaaagactttgtgacggtccat
ggacttggtaaaaaggtgtttgtaaatgcagttggctttttacgtgtccggcgtagtggg
ttggctgctagcagtagccaattcattgatttgttagatgatacaagaatacatccagaa
tcttatggtctggctcaagagatggctaaagatgtttatgaaatggataatggtgacgca
aatgatgatgatgaggcgctggaaatggcaatagagcatgttagagaccgacctagttta
ttgaaaacaatcgatcttaatgtgtatctcaaagataagaagcgcgagaacaagaaggag
actttcaaggatataaaaggggagttgatacatggttttcaggactggcgtaaaccgtat
aaagaacctagtcaagatgaggagttctatatgatttctggtgaaactgaggatacgctt
gctgaaggaagaatagttcaggccactgtccgcagggtgcaaggtctaagggcaacatgt
gcactggaatctggactgactggaatgctttcaagggaagactatgcagatgattggaga
gacatatctgagctgtctgataggctgcatgaaggtgacatactcacctgcaagatcaaa
tccattcaaaagaatagatatcaggtgttcctagtttgtagagacagtgagatgaggaat
gacaggtatcagcaaatccgaaaccttgatccatattatcgtgaagatcgcagtactatt
caaagtgagcaagaaaaggctcgtaaagagaaggagcttgcgaagaaacacttcaagcca
aggatgatagttcatcctcgcttccagaatataacagctgatgaagcaatggagatctta
tctgacaaggatcctggggaaagtatcattcgtcctagttctcgtgggccatcatattta
actctgactcttaaagtttatgatggagtttatgcacacaaggacatatctgaaggtgga
aaggaacacaaggatattacaagtttacttcgaattggaaagacactgaaaattggggat
gacacttttgaggatttggatgaggtaatggaccgttatgttgatcccttggtgtctcat
ctaaaggcaatgctaagttatcgcaagttcagaactggaaccaaagcagaagttgatgag
caactaagggttgagaaatcggattatcctacaagaatagtttattctttcggaatttct
cacgaacatccaggaacattcattctgacatatattaggagcacaaatccacatcatgaa
tatgttggtctatatcctaagggattcaagtttcggaagaggatgtttgaggacattgat
cggcttgtggcatattttcagaggcacattgatgatcctgtgcatgaatcgacaccatcc
attagatcagttgctgccatggtaccaatgcgaagccctgctactgggggctcttcaggg
tcatccatgggtagtggctggggtggttccacaaatgacggtggatggagaagccagtct
tttgatagagatcgttcttctggccctggttccaggacaggtcggaatgattatagaaat
ggaggtagtagagatagtcatcagagtgggttaccaaggccatacggtgggagaggacat
ggtcgaggctcttataacaacagaggaaatgacaggcaggattctggttatgacaataat
tccagatgggattcttctgctaaggatggtgatccaggttggggcagtttccctggtgct
aaagtccagaactcacctggcaaggaagcctttcctggtggctggggaagtggtggcact
gacactgggaattctggatggggttctggcttcaagagaggttcgtctgggggtgggggt
gggggtgggggtgggggatag
DBGET
integrated database retrieval system
