Jatropha curcas (Barbados nut): 105642007
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Entry
105642007 CDS
T03922
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105642007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105642007
03041 Spliceosome [BR:
jcu03041
]
105642007
03032 DNA replication proteins [BR:
jcu03032
]
105642007
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
105642007
Spliceosome [BR:
jcu03041
]
Complex A
U1 snRNP components
Sm proteins
105642007
U2 snRNP components
105642007
Complex B
U1 snRNP components
105642007
U4/U6.U5 tri-snRNP components
105642007
Complex C
U2 snRNP components
105642007
DNA replication proteins [BR:
jcu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
105642007
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105642007
NCBI-ProteinID:
XP_012082072
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQFTGNL
GEILIRCNNVLYLRGVPEDEDIEDADRD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctaccataccagttaatcctaagcctttcttgaacaacttgactgggaagactgtt
attgtaaaactcaagtggggaatggaatacaaaggttttctcgcttcagtagattcatac
atgaatctacagcttggcaacactgaagaatatattgatggacaattcacaggaaatctt
ggagagattctgattagatgcaacaacgttctctatcttcgtggtgttccagaggatgaa
gacatagaagatgcagaccgtgactga
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integrated database retrieval system
