Jatropha curcas (Barbados nut): 105642105
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Entry
105642105 CDS
T03922
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
105642105
Enzymes [BR:
jcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
105642105
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
105642105
NCBI-ProteinID:
XP_037491831
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MTMKKSYSICMHLEIFACIWLLNVMQVSLCSPLNFSHRKILTSRLSSGVVLREEPKFVVI
DNGIVRVTLSKPGGFVTGIKYNGVENILETKNDDEDRGYWDIVWYKPGAEGIFDKLHGAN
FSVITKNEDQVEVSFNKKWNISMKDNIVPLNIDKRYILRRGSSGFFTYTIMERLEGWPTV
NMDQIRIVFKLQNKMFNYMAVSDNIQRIMPTFQDRQNSQALAYPEAVLLTKTSNPKLRGE
VDDKYQYSMDRKDSKVHGWISQNSAMGIWVIRPSDEFCTGGPFRQELTSHAGPCLLSMFT
SSHYLGKYKNTKYEEPWKMVFGPVYIYLNSNSTADKQALWNDAKRQMSTEVESWPYNFTQ
SKDFSYSDKRGTASGQITIINEGNSKLANGAYVGLAAPGDVDSWQFETKGYQFWTQADNE
GCFTIENIRVGTYNLYAWVPGFVGNYKYGENITITPGSNIKLGVLNYESPRNGPTIWEIG
YPDRSAAEFFVPDPESTLTNKLFINQPTEKFRQYGLWERYTNLYPTEDLVYNVGTSNCSR
DWFFIHVPRNTGKDVYKPTTWQITFELETVIQTGNYTLQLALASATEAEIQVRFNDPNAK
RPLFTTGLIGKDNAIARHGIHGIYWFYTIDVPNDVLVNGKNTIYLTQTRVAAIFHGVMYD
YIRLEGPTST
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaagaaatcttattctatttgcatgcacttggaaatatttgcttgcatatgg
ttactaaatgtgatgcaagtgagtctttgttctccactcaatttttctcacaggaaaatt
ttgaccagcaggttgtcctctggagttgtattgcgtgaagagcctaaatttgtggtgatt
gataatggaattgttcgagttactttatccaagcctggtggttttgtcactggaataaaa
tataatggagttgagaatatactagaaactaaaaatgatgatgaggatcgtggttattgg
gacattgtttggtacaaaccaggggctgagggcatttttgacaagttacacggagcaaat
tttagtgttataacgaaaaatgaagaccaagtggaagtttcttttaataaaaaatggaat
atttccatgaaagataacatagttcctctaaacatcgacaaaaggtatatactgcggcgt
gggagttcaggatttttcacttatactataatggaacgtttagaagggtggcctactgtc
aacatggatcaaattaggattgttttcaaactacaaaataaaatgttcaactatatggca
gtatcagacaacatacaaaggatcatgcctacatttcaagatcgtcaaaacagtcaagct
ctagcatatcctgaagctgttctcttgaccaaaacaagcaatccaaaattgcgtggagag
gtcgatgacaagtatcaatattctatggatcgaaaagatagcaaagtgcatggctggata
tcacaaaattcggcaatgggaatttgggtgatccgacctagtgatgagttctgtacaggt
ggaccctttagacaggaactaacatctcatgctggtccatgtcttttatctatgtttact
agttctcattatttggggaagtataaaaatacaaaatatgaagagccatggaaaatggtt
tttgggcctgtttacatttatcttaattccaactcaactgctgataaacaagcactttgg
aatgatgctaaaagacagatgtcaacggaagttgaaagttggccatacaattttactcaa
tcaaaagatttctcttattctgataaacgaggaactgcctcaggccaaataacaataata
aatgaagggaattccaaattggcaaatggtgcttatgttggcttggcagctccaggagat
gtagattcatggcaatttgaaaccaagggttatcaattctggactcaagctgataatgag
gggtgtttcacaattgaaaatattcgagttggaacttataatttgtatgcatgggttcct
ggatttgttggaaactacaagtatggtgagaacatcaccattacaccaggaagcaatatt
aaattgggtgtccttaactatgaatctcctagaaatgggccaaccatatgggaaataggg
tatcctgaccgatccgctgctgagttctttgtgccggatccagagtcaacacttacaaac
aaattattcatcaaccaaccaactgaaaagtttaggcaatacggattatgggaacgatac
actaacttatatcctacagaagatcttgtatacaatgttggcactagtaactgcagtcga
gattggttttttattcatgtaccaagaaatactgggaaagatgtgtacaagccaaccaca
tggcaaataactttcgagctcgaaactgtgattcaaactggaaattatacattgcaatta
gccttagcatctgctactgaagctgaaatacaggtgaggttcaacgatccaaatgccaag
cgacctcttttcacaacagggctaataggcaaggacaatgcaattgcaagacatggaatt
catggtatctactggttttataccattgatgtgcctaatgatgtacttgttaatggaaaa
aatacaatttatttgactcagacaagagttgccgcaatttttcatggtgtaatgtatgat
tacatacgtttggaagggccaacaagtacctaa
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