Jatropha curcas (Barbados nut): 105642168
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Entry
105642168 CDS
T03922
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105642168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jcu04121
]
105642168
Enzymes [BR:
jcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105642168
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
HECT type E3
105642168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Arm
ARM_ARMC5
HEAT_2
Motif
Other DBs
NCBI-GeneID:
105642168
NCBI-ProteinID:
XP_012082279
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MGNRGQKRAEIIEEFPADKRACSSLEFRPSSSNSSIQTNINSISSTPETRDAGTHDADMD
TSSSGSASSRSEEEDHERDSAYGSCDSDEAIPGRSSLHNYQRQRSFGDHGRLRSALSTLS
EGTESSGLLAALTELCEVLSFCTEDSLSSMMADSLSPVLVQHARHESNPDIMLLAIRALT
YLCDVFPRASAFLVRHDAVPVLCQRLMAIEYLDVAEQCLQALEKISREQPLACLQAGAIM
AVLNFIDFFSTSVQRVALSTVVNICKKLPTESPSPFMEAVPTLCNLLQYEDRQLVENVVI
CLMKIAERVSQSSEMLDDLCKHGLINEATHLIHLNSRTTLSQPIYNGLIGLLVKLASGSM
VAFRTLYELNISSTLKDMLATYDASHGMSSLYAVDGQSNQVHEVLKLLNELLPLVPKDHD
VQQEVSEKESFLVNHPELLRKFGSDMLPMLIQVVNSGANIYVCFGCLSVINKLVYFSKSD
ILVELFKNANIPSFLAGVFTRKDHHVLILALQIAEIILQKLSDIFLNAFIKEGVFFAIDA
LMMPEKCSPSMFPVFNSIQLTSDFNQKSVSKVVRRCLCYAFDTGQSSVTSEAGTCKLVKD
GVQSLAKHIKTTYFAPELCDFENGLTDILQKLRALSASLSDLMNFPTSVDSSSQDEEKFY
CLLRQIMDKLDGREPVSTFEFIESGIVKSLVKYISNGQYLSKVELHGKFDHYYLVEKRLK
VFARFFSSYSSLVEGLPVSILIRKLQSALASLENFPVILSHSSKQRNWFATVPNGRCISH
PCLRVRFVRGEGETCISDYSDNVFTVDPFSSLDAIEGFLFPRVRMERTKQTETTTLSMDP
MESIHFQIPSSNSCEGQSSGATEPDSNSTDLHQMQEDEAPLEQVINLQPQIPGDTTTSDD
GDIANPDQVGQFPSVEDINGKTGNPASSSNGDALPKLAFYLEGQELDRSLTLYQAILQQR
IKADLDINTGAKLWSQVYTLTYRIAAESNGDSPKKCHSLAQNSSLVDKIGAHMQCTSFCT
SIFNCELASDLDKLSPAYDVLFLLKSLEGLNRYTFHLMSCERVHAFAEGLINDLDSLKVV
VHSVSQNEFVSSKLTEKLEQQMRDSFAVSIGGMPLWCNQLMSSCPFLFSFEARCKYFRLS
AFGSQQVQMQTPSNTSGVSRDRRSNLGTMHRKKFLVLRDRILESAAQMMDLYAHVKVPIE
VVYNEEVGSGLGPTLEFYTLVSHEFQKYGLGMWREDHSSLAARKGLSIDDSEILTSPFGL
FPRPWPSTLDISDGIQFSDVIKKFVLLGEIVAKALQDGRVLDLPFSKAFYKLILQQELNL
CDIQSFDPDLGRTLLEFEALVDRKKILESVLGENLSSTFDASFRSTRIEDLYLDFTLPGY
PNYIVHPDHKLVNMDNLEEYVSLVVDATTHAGISRQVEAFKSGFNQVFPIKYLQIFTEEE
LERLLCGERVFWAFNELLDHIKFDHGYTASSPPINNLLEIMQEFNQEQRRAFLQFVTGAP
RLPPGGLASLSPKLTIVRKHCSNCADADLPSVMTCANYLKLPPYSSKDKMKEKLLYAITE
GQGSFHLS
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcgtgggcaaaagcgggcagagattatagaagaatttccagcggataagcga
gcttgtagttcattggaatttagaccaagttcttctaactcatcaattcaaactaatata
aattccataagttcaacacctgaaacccgtgatgctggaacccacgatgcagatatggat
acttcatcctctggttcagcttcaagccggtcagaggaggaagatcatgaaagggattca
gcttatggctcatgtgattctgatgaagcaataccaggacgtagcagtttgcataattat
cagaggcagagatcattcggtgatcatggcagattgaggagtgctttatccactttaagt
gaaggcactgagtcttctgggctattagctgctcttacagaattgtgcgaggtgctctca
ttttgtactgaggattctctttcgagcatgatggcagactctttatcgcctgttcttgtt
cagcatgcaaggcatgagagcaacccagatataatgttgttagctataagggctttaact
tatctgtgtgatgtgtttccccgagcatctgcttttcttgttagacatgatgcggttccg
gttctttgtcaaagactaatggcgattgagtacttagatgtagctgaacagtgcttgcaa
gcattggagaaaatatctcgtgaacaaccacttgcatgtctgcaggctggggcaataatg
gctgttctgaactttattgacttcttctctaccagtgtccaaagagttgcactttcaact
gtggtcaatatatgtaagaaactaccaacagaaagcccttctccttttatggaggctgtt
ccaacattatgcaatctcctacagtatgaggatcgacagcttgttgaaaatgtagtgatt
tgcttgatgaaaatagctgagcgggttagtcagtcttctgagatgctggatgatctatgt
aagcatggcctaatcaatgaagctactcatctaatacatttgaatagccgaaccactcta
tctcaaccgatatataatggtttgattgggctgctggtcaaacttgcctctggttcaatg
gtggctttcaggacactttatgagcttaatataagcagcaccttgaaggacatgttagct
acttatgatgcttcacatgggatgtcttctctctatgcagtagatgggcagagcaaccag
gtacatgaagttctaaagttgctaaatgagctcctccctttggtaccaaaggatcacgat
gttcaacaagaagtgtcggaaaaagaatcatttttagttaatcatcccgaacttttgcgt
aagtttggatctgatatgctacccatgttgatccaggtcgttaattctggtgcaaatatt
tatgtttgctttgggtgcctatctgtcatcaacaaattggtctatttcagcaaatctgac
atccttgttgaattatttaagaatgcaaacattccaagttttttggctggggtttttacg
cggaaggatcaccatgtgctgatattagccttacaaattgctgagataattttgcaaaaa
ctttcagatattttcctgaatgcattcattaaggaaggtgtcttttttgccattgatgcc
cttatgatgccagaaaaatgttccccttcaatgtttccagtgttcaacagcattcagctt
acatctgacttcaatcaaaagtctgtttcaaaagttgttcgaagatgcttatgttatgca
tttgatacgggccagtcttctgtaacctcagaggcaggaacatgcaagcttgtaaaggat
ggcgttcaaagtcttgcaaaacatataaaaactacttactttgctccagaattatgtgac
tttgagaatgggttgacagatatccttcaaaagcttagagctctttctgcatcattgagt
gatctgatgaattttcccacaagtgtggatagttccagccaagatgaagagaagttttat
tgtttattgcgtcaaattatggataagcttgatggaagagaacctgtttccacttttgaa
tttattgagagtggaattgtgaagtcattggtaaaatacatatccaatggtcagtatttg
agtaaggtggaacttcatggtaagtttgaccattattatcttgtagaaaaaagacttaag
gtgtttgcaaggtttttttcatcttattcaagccttgttgaagggttacccgtgtccatt
ttaatacggaaattgcaaagtgccttagcttctctggagaatttccctgttattttgagc
cattcatccaagcaaaggaactggtttgccaccgttcctaatggacgttgcatatctcac
ccatgcctgagagttcgttttgtaaggggagagggagagacatgtatttctgattactct
gataatgttttcactgttgaccctttttcttcgttggatgcaattgaaggatttttgttt
cctagagttagaatggaaagaaccaaacaaacagaaacaactactttatctatggatcca
atggaaagcatacattttcagattccatcaagtaactcttgtgaaggtcaaagctcaggt
gccactgagcctgacagcaattctactgatttgcatcagatgcaggaggatgaggctcca
ctggaacaagtgataaatttacaaccgcaaattcctggtgatactacgacttcagatgat
ggtgacattgccaatcctgaccaggtgggacagtttccttctgtggaagacatcaatggg
aaaactgggaatcctgcatcctctagcaatggagatgctttgccaaaactggcattttac
ctagaagggcaagaattggaccggagtttgacactgtatcaagcaattctccaacagaga
attaaagctgacctcgacattaatacaggtgcaaagttgtggagtcaagtctacaccctg
acttatagaatagctgcagaaagtaatggtgatagtcctaaaaaatgtcatagtttggct
caaaattcctctttggtggataagattggggctcatatgcaatgcacttcattttgcacc
agcatattcaattgtgaacttgcttctgacttggataagttgagtcctgcttatgatgta
ttatttctgcttaaaagtttggaaggcttgaacaggtatacatttcatctgatgtcttgt
gaaagagtacatgcatttgctgaagggctaatcaatgacttagatagtttaaaagtggtg
gttcattcagtctcacagaatgaatttgtgagcagtaagttgacagaaaaactagagcag
cagatgcgagattctttcgctgtttctattggtggtatgccattgtggtgtaatcaactt
atgtcttcatgccccttcttgtttagcttcgaggcaagatgtaaatacttccgattgtca
gcatttggatctcagcaagttcagatgcagacaccttctaatacctcaggagtttctaga
gacaggaggtcaaatctaggtactatgcaccgtaaaaagtttttagttttgcgtgaccgg
attctagagtctgctgcgcaaatgatggacctttatgctcatgttaaagtgccgattgaa
gtggtatataatgaagaagttggtagcggtcttggtccaacattggaattttataccttg
gtcagtcatgagtttcagaagtatggtcttggcatgtggagagaagatcatagttcactt
gcagccaggaaaggattatcgattgatgattctgaaattctaacatctccttttggcctt
tttccccgtccatggccatcgacgctggatatctctgatggcatacaattttctgatgtt
attaaaaagtttgtcctcttgggagaaattgtggcaaaggctcttcaagatggaagggtc
ttggatctgccattctccaaagccttctataagcttattcttcagcaggaactgaatttg
tgcgacattcagtcatttgatcctgatctgggcaggacattgctagagtttgaagctctt
gttgataggaaaaagattttggaatcagttttaggagaaaatttgtcttctacttttgat
gcaagcttccgaagtaccagaattgaggatctctatcttgacttcactcttcctgggtat
cccaattacattgtccacccggatcataaattagtaaatatggataacttggaggagtat
gtttctcttgttgtggatgctactacacatgctggaatttctagacaagttgaagctttt
aagtctggatttaatcaggtttttccaattaagtatcttcagatttttactgaggaggaa
ctagagcgattactatgtggagaacgtgttttctgggctttcaatgagcttttggatcat
atcaagtttgatcatggatacactgctagcagtcctcctattaataatttactggaaatc
atgcaagagttcaatcaagaacaacggcgagcatttctgcagtttgtaactggggcacct
cgacttcctcctggaggattggcatccttgagtccaaaattgacaattgtccggaagcat
tgtagtaactgtgcggatgcagacctacccagtgtgatgacttgtgccaattacctgaag
ttgccaccttattcttcaaaagacaagatgaaagagaagctattgtatgccataacagaa
ggacaaggctcattccacctctcgtag
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integrated database retrieval system
