Jatropha curcas (Barbados nut): 105642201
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Entry
105642201 CDS
T03922
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jcu03000
]
105642201
Transcription factors [BR:
jcu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105642201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
ComP_DUS
Motif
Other DBs
NCBI-GeneID:
105642201
NCBI-ProteinID:
XP_012082336
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MMSGEAFSIPSSLPGFALQEQNANPNPKPNPNPAAKKKRNLPGTPDPDAEVIALSPKTLM
ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEVKKKVYICPEKTCVHHDPSR
ALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKD
SFITHRAFCDALAEESSRINSTIPTNLNFRNDTVAVNLPPGVVPGSGVEDIADINVSQFS
SAGFRADFNGYQNPGLSLWLNQANSQMNPANTLYPSSSSTGLPIYGSSSSNTSFGNLSLS
GLAHGLKEEEGDNKGTNLVDSSLPSLYSDNNSNQNKQSKSTGPMSATALLQKAAQMGSTR
SNNQSFFASNNHYGIMSSSSSSNATNINSLSQVFQNVSNKQPGEFNLTATPGSVAMRDSI
MASSTSLDQVLIMQSSGKHNDPVQLKLQQGNSSSIENDLTRDFLGMSGGQSGRPFLPQDL
AKFASISSAMGLSQFTSNP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggtgaagctttctcaattcccagttctttaccggggtttgctcttcaagaa
cagaatgcaaaccctaaccctaaacctaatcctaatccagctgccaagaagaagagaaat
ttgcctggaacaccagatccagatgctgaggttattgctttatctccgaagactcttatg
gctacaaaccgattcgtatgcgaaatatgcaataaaggtttccaaagagatcaaaacttg
cagctccatcgaagaggtcataatcttccatggaagttaaggcaacgaacgaacaaagaa
gtcaaaaagaaagtttatatatgcccggaaaagacctgcgttcaccatgatccgtcaaga
gctctcggtgatctcaccggaataaaaaagcatttcagcagaaaacatggagaaaagaaa
tggaagtgtgagaaatgctcaaagaaatatgcagttcaatctgactggaaagctcactcc
aagacttgtgggactagagaatataaatgcgattgtggaactttattttccaggaaagat
agcttcattacgcatagagccttttgtgatgcattagctgaagaaagttcaagaatcaat
tcaactataccgacaaatctaaatttcaggaatgatacagtagcagtgaatttgcctcct
ggagtagttccaggctccggagttgaagatattgcagacattaatgtttctcaattcagt
tctgcgggttttagagcagattttaatgggtatcaaaatcctggcttatctttgtggcta
aatcaagcaaattctcagatgaatcctgctaatactctctatccatcttcgagttcaact
gggttgcccatttatggttcatcatcaagcaataccagttttggtaatttaagcctatca
ggattggctcatggattaaaagaagaagaaggtgacaataaagggactaatttggtggat
tcttcattgccttctctgtattctgataacaatagcaatcaaaataagcaatcaaagtca
actggaccaatgtctgctactgctcttctccaaaaagcagcacaaatgggttctacaaga
tcaaataatcaatcttttttcgcaagtaataaccattatggaataatgagctcatcttct
tcttcaaatgcgacgaacatcaactctcttagtcaagttttccaaaatgttagcaataag
caacctggagagtttaatttaactgcaacaccaggcagtgtagctatgcgagattcaata
atggcttcatcaactagtctcgatcaagttttgattatgcaatccagtggaaaacataat
gacccagttcagttaaagctacaacaaggtaattcaagttctatagagaatgatttaaca
agagattttcttggaatgagtggtggtcaatctggtcgtccatttttgcctcaagattta
gctaaatttgcttcaataagctccgccatgggtctaagccaattcactagcaatccatga
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