Jatropha curcas (Barbados nut): 105642284
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Entry
105642284 CDS
T03922
Name
(RefSeq) probable pectate lyase 12 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu00040
Pentose and glucuronate interconversions
jcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105642284
Enzymes [BR:
jcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105642284
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Ortholog
Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
105642284
NCBI-ProteinID:
XP_012082451
UniProt:
A0A067K2B3
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All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MLQISYIVLILLVTSFSPLGLAMLNLTFPTPHPNPEEVVQDVQRRVNASISRRQMLQFSQ
EDQSPCQTGNPIDDCWKCDPDWANNRQGLADCAIGFGQYAMGGKNGEYYIVTDSSDDDAV
NPKPGTLRYAVIQPEPLWIVFPTNMLIHLSQELIFNSYKTLDGRGANVHIVGGGCITLQY
ISNIIIHNIHIHHCVQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSHCKD
GLIDAVMGSTGITISNNYFSHHNEVMLLGHSDDYLPDSGMQVTIAFNHFGEKLVQRMPRC
RRGYIHVVNNDFTKWEMYAIGGSGNPTINSQGNRYTAPSDPNAKEVTKRVDTADGDWKGW
NWRSEGDIMVNGAFFVASGEELEVKYEKAYSVEPKSAVLIDLITFHAGVLGVGGRENTLG
MWSTGANGGEASGEDSGDEFLDDYNGNSPPLSPPSIYVLFPLYIAISCLVTGHIIGLTSM
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaataagctacattgtcttaattcttcttgtgacctcgttttctccacttgga
ttagcaatgctaaacttgacatttccaactcctcatcccaaccctgaagaagttgttcaa
gatgttcaaagaagagtaaatgcttcaatttcaagaaggcaaatgctacagttttctcaa
gaagaccaatccccttgccaaacaggaaaccctatagatgattgttggaaatgtgaccca
gactgggccaacaatcgccaagggctagccgattgtgctataggttttggccaatatgca
atgggaggcaaaaatggtgagtactacatagtgactgactcctcagacgacgatgctgtt
aatccaaaaccaggaactctaagatatgctgtaattcaaccagagcctctatggattgtg
tttcctacaaatatgctaattcatctctcccaagaactcattttcaacagctacaagact
ctcgatggacgtggggctaatgtgcatatagtgggtggtgggtgcattactttgcagtac
ataagcaatattattattcacaatatacacattcaccattgtgttcagtcaggtaatact
aatgtgcggtcaagcccaacccactatgggttcagaacaaaatcagacggtgatggaatc
tccatctttgggtccaaagacatatggattgatcattgctcactgtctcactgcaaggat
ggtttgattgatgctgtgatggggtctacaggaataacaatatcaaacaactatttttca
catcacaatgaggtgatgctattgggtcacagtgatgattatttgccagactcaggaatg
caagtgaccatagcatttaaccattttggagagaaattggtgcagagaatgcctagatgc
agaagagggtatattcatgtggtcaataatgattttacaaaatgggaaatgtacgcaatt
ggtggaagtggtaatcctacaattaatagccaaggcaatcggtacactgctccttctgat
ccaaatgccaaggaggtaacaaagagagtggacacagcagacggggattggaaaggatgg
aattggagatcagaaggagacataatggtaaatggagcattttttgtagcgtcaggagag
gaattagaggttaagtatgagaaggcatacagtgtggagcctaagtctgctgttctaatt
gatttgatcaccttccatgctggtgttcttggagttggtggcagggaaaacacacttgga
atgtggagcaccggtgcaaacggtggtgaagcgagcggcgaagattccggcgatgagttc
ttggatgactataatggaaacagtcctccattgtcacctccctctatctacgttcttttc
cccctttatattgcaatttcttgcttggtaactggtcacattataggcctcacatcaatg
ttatag
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