Jatropha curcas (Barbados nut): 105642451
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Entry
105642451 CDS
T03922
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105642451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jcu04121
]
105642451
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105642451
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
105642451
NCBI-ProteinID:
XP_012082666
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MLRMTSSFPEEVLEHVFSFIQHDKDRNAISMVCKSWYEIERWCRRRIFVGNCYAVSPSMV
IRRFPEVRSIELKGKPHFADFNLVPDGWGGYVYPWIAAMASAYPWLEEIRLKRMVVTDET
LELIAKSFKNFKVLVLSSCEGFSTDGLAAIAANCRNLRELDLRESEVDDPSGHWLSHFPD
SFTSLVSLNISCLVSEVSFSALERLVGRCPNLRTLRLNRTVPLDRLANILSRAPQLVELG
TGTYSSELRPDVFSSLSGAFSGCKELKSLSGFWDVVPGYLPAIYPICSGLTSLNLSYATI
QSPDVIKLVSQCQSLQRLWVLDYIEDIGLEALATFCKDLRELRVFPSEPFAVEPNVSLTE
QGLVSVSEGCPKLQSVLYFCHQMTNDALITVARNRPNMTRFRLCIMEPRTPDYTTLQPLD
DGFGAIVQHCKDLQRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVMSGCE
NLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDER
GPPDSRPESCPVEKLYIYRTVAGPRFDMPGFVWTMDEDSALRLS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaatgacgagctcgttccctgaggaggttctggagcacgtgttctccttcata
cagcacgacaaggacagaaacgcgatatccatggtgtgcaagtcgtggtacgagatagag
aggtggtgtaggaggaggatttttgttggcaactgttatgctgtgagtccatcaatggtg
atacggaggtttccggaagtgagatcgatagagcttaaaggaaagcctcactttgctgac
ttcaatctggtgcctgatggttggggtggttatgtttacccgtggatcgcggctatggcc
tctgcttacccttggcttgaagagatcaggttgaagaggatggtggttacagacgagacc
ttggagctgattgctaagtcctttaagaattttaaggttttggtgctttcttcgtgtgag
ggtttctctactgatggacttgctgccattgctgccaattgcaggaatctaagggagctg
gatttgcgggagagtgaggtggacgatcctagtgggcattggttaagccactttccagac
tcttttacgtcactggtctctcttaacatttcctgcttagtttctgaggtgagtttctcg
gccttggagcgtctggtgggtcggtgccccaatctgaggactcttcggctcaaccgtacc
gtgcctcttgacaggcttgcaaacatactttctagggcaccccagctagttgagttgggc
acaggaacctactcatctgagctgcggcctgatgtcttctcaagcctatctggagctttt
tctgggtgcaaggaattgaaaagtttatctggattttgggatgtggttccaggttacctt
ccagcaatttatcctatttgctctggcctaacatcgttgaacttgagctatgctactatc
caaagccctgatgtcattaaacttgtcagtcaatgtcagagtttgcagcggttgtgggtg
ctggattacatcgaagatattggacttgaagctcttgcaacattttgcaaggacctgcga
gaattgagggttttcccatctgagccatttgctgtggaaccaaatgtatccttgacagag
cagggccttgtctctgtttctgagggttgccctaaactccaatctgttctgtacttttgc
catcaaatgaccaatgatgccttgataacagttgctaggaatcgtccaaacatgactcgc
tttcggctttgtattatggaaccacgtacccctgattacacaacccttcagccactagat
gatggttttggagccattgttcaacactgcaaggatctccagcgcctttccctgtcaggt
ctcctcactgaccgtgtttttgagtacattggaacttatgccaaaaagttagaaatgctc
tctgtagcctttgccggagatagtgatttggggctccatcatgtgatgtctggatgtgaa
aacctacgcaaactagagattcgagattgtccatttggggacaaggctcttttggccaat
gctgcaaagctggagacaatgcgatccctttggatgtcttcttgctcggtgagttacgga
gcatgtaaattgctaggtcagaagatgcctaggctcaatgttgaagttattgatgagagg
ggacctccagattcaaggccagaaagttgtccagttgagaagctttacatctataggact
gtcgctgggcctagattcgacatgcctggttttgtttggacaatggatgaagattctgca
ttgaggctttcttga
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