Jatropha curcas (Barbados nut): 105642504
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Entry
105642504 CDS
T03922
Name
(RefSeq) DNA mismatch repair protein PMS1
KO
K10858
DNA mismatch repair protein PMS2
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03430
Mismatch repair
jcu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105642504
03460 Fanconi anemia pathway
105642504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105642504
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105642504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
105642504
NCBI-ProteinID:
XP_012082736
UniProt:
A0A067JW62
LinkDB
All DBs
Position
Unknown
AA seq
954 aa
AA seq
DB search
MEETINVSSSIIRPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKEYGE
EWFQVIDNGCGISPNNFKVLALKHHTSKLADFPDLQSLTTFGFRGEALSSLCALGDLTVE
TRTKNEAVATHLTYDRSGLLTAERKAARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGK
LTSLLNAYALIAKGVRLVCTNTTGKNAKSVVLKTQGSDSLKDNIITVFGMSTFSCLQPVN
ICISDSCKVDGFLSKPGQGSGRNLGDRQYYFVNSRPVDMPKVSKLVNELYRGANSRQYPI
AIMNFTVPTKACDVNVTPDKRKIFFSDENSILLALREGLQQIYSPSNATYLVNKYEEHMK
KTSGSQSPHEKSNVLPKKISVVRNDCEEIHMKKHTAEGSNPQQTVEIKSDTSDVGENNDE
KYTAKDFSLRIHDIQKAYSFLKTKNGQPTTCHDSLTNQDVTSPSSAAGKDISENRDSNSS
LRSVQSTIKKFVTVSKRKHEDDRTALSEIPILRKETLRNPLKKGNSEPNAAITSSPFNHQ
LADNSAKVSEAEPSKFHRADMSFNRIRSYLSYRGNDNDEKHGEEPMAEEKATYVADVVSI
ASHEGLEKISEDLMDPAGEEKASPIVSVASLTSPRRGLDNMSEDLIATSLLQSPGSALDV
PKPSAQKICSTLQFSFQELAEKRKQRLSRLQFSSYASGGMKMKSHRSYAAATLELSQPDN
EERKARVLAAATTELERLFRKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNF
ERLCQSTILNQQPLLRPLWLDLSPEEEIVVSMNMDIIRKNGFALEEDLHAPPGQRFKLKA
VPFSKNITFGVEDVKDLISTLADSQGDCSIIGSYKMDTHDSVCPSRVRAMLASRACRSSI
MIGDPLGRNEMQKILEHLADLKSPWNCPHGRPTMRHLLDLTSIYKRSEENDGTL
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacaattaatgtaagttcttcgattattaggcctataaacaaaggtgttgtg
catagaatatgcgctggtcaagtgattttggacctttcatcggctgtgaaggagctggtt
gaaaacagtttggacgctggcgccactagcattgaaatctctttgaaagagtacggtgaa
gagtggttccaggtcatcgacaatggatgtggcatttccccgaacaatttcaaggttctt
gcgctcaagcatcatacttctaaattggcagattttcctgatcttcaatctttgacaaca
tttggttttagaggggaggcattgagctcactttgtgcattaggagacctgactgttgaa
acacgaactaagaatgaggcggtagcaacacacttgacttatgatcgctcaggtttacta
actgctgaaaggaaagcagctcgtcaaattggcactactgtcactgttaagaagttgttc
tccaatttacctgtgcgaagcaaagaatttagccgcaacattcgcaaggagtatgggaag
cttacttctttattaaatgcctacgcgcttattgcaaaaggtgttcggttagtttgcacc
aatacaactggtaagaatgcaaagtcggttgtgcttaaaacacaaggaagtgactcgctt
aaagataacatcataacagtatttggcatgagcaccttcagctgcttacagcctgttaac
atatgcatatcagacagttgcaaggttgatggcttcctttctaagcctggacaaggtagc
ggccgcaatttaggagatagacaatactattttgtaaatagtcgaccagtggatatgcct
aaagtcagcaagcttgtgaatgaattatacagaggagcaaactctaggcaatatcccata
gcaatcatgaatttcacagttccaaccaaagcctgcgatgtgaatgtaactccggataaa
agaaaaatattcttttctgatgagaactccatattgcttgctctaagggagggtttacag
cagatttattccccaagtaatgccacttatttggtcaacaaatatgaggagcatatgaag
aagaccagtggctctcagtctcctcatgagaagtctaatgtgttgccaaaaaagatatct
gtagttcgcaatgactgtgaagaaattcacatgaaaaagcatacagcagaaggcagtaat
ccgcaacaaacagttgaaatcaaatctgatacctcggatgttggagaaaataatgatgaa
aagtacacagcgaaggacttcagtctgagaatacatgacattcaaaaggcctatagtttt
ttgaagactaaaaatgggcaaccaacaacttgccatgatagtctaaccaatcaagatgtt
acttccccttcaagtgcggctggaaaagatatttctgaaaatagagattctaatagttct
ctacgttctgttcagtcaacaattaaaaagttcgtaactgtaagtaagagaaaacatgaa
gatgatagaacagcactatctgaaattcccatcctaagaaaggaaactcttcgaaatcca
cttaagaaaggcaactctgagcctaatgctgcaattacaagttctccatttaatcatcag
ctcgctgataattctgctaaggtgagtgaagctgagccgtccaagtttcatagagcagac
atgagcttcaacagaatcagaagttatctttcatatagagggaatgacaatgatgaaaaa
catggggaggaaccgatggctgaagaaaaagctacttatgtggctgatgttgtatcaatt
gcttctcatgaaggtcttgagaaaatatctgaagatcttatggatcctgcaggtgaagaa
aaagcctcacctattgttagtgttgcatctctcacttctccaaggaggggccttgacaat
atgtctgaggatctgattgccacttctctattacaatctcctggttcagctttagatgtt
ccaaagccttctgcccaaaagatatgctccaccttgcaatttagttttcaggaactggca
gaaaaaaggaagcagaggctgtcaagattacaattcagcagttatgcatctggaggcatg
aagatgaaaagccataggagttatgctgctgcaacactagagctctctcaaccagataat
gaggagcgaaaggcaagggttttagctgcagctactacagagttagaaagacttttcaga
aaacaggactttggaagaatgaaggtgattggccaatttaatcttggattcattattggg
aagttggaccaagatttatttattgtggatcagcatgctgctgatgagaaatacaatttt
gagcggctatgccaatcgacaatcttgaaccagcagcctttgttgcggccattgtggttg
gatttatctccagaggaggaaatagttgtttcaatgaacatggatataatcaggaaaaat
ggatttgctttggaagaggatcttcatgcaccacctgggcagcgatttaagctaaaagct
gtcccttttagtaagaatataacttttggagttgaagatgtcaaggacttgatctctacg
ctagccgatagtcaaggggactgctcaataattggtagttacaaaatggacacacatgat
tctgtctgcccatcaagagttcgtgcaatgctggcatcacgggcatgcaggtcatctatt
atgattggagatcctctaggaaggaatgagatgcaaaagatactggagcatttggcagat
ctaaaatcaccatggaactgtccccatggaaggccaacgatgcgccatttgttagactta
acatccatttacaaaagatcagaagaaaatgatggaacattgtga
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