KEGG   Jatropha curcas (Barbados nut): 105642505
Entry
105642505         CDS       T03922                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03018  RNA degradation
jcu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105642505
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105642505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jcu03019]
    105642505
   03041 Spliceosome [BR:jcu03041]
    105642505
Messenger RNA biogenesis [BR:jcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105642505
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105642505
Spliceosome [BR:jcu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105642505
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 105642505
NCBI-ProteinID: XP_012082737
LinkDB
Position
Unknown
AA seq 148 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGLGRGRGRGREDGGRPVKGIGRGLDDGG
AKATGGGRGRGGSGGKTGGNRGAGRGRG
NT seq 447 nt   +upstreamnt  +downstreamnt
atgcttcctctttctctacttaagactgcacagggtcaccccatgttggtggaactgaaa
aatggggagacttacaatggacatttggtcaattgtgatacttggatgaacatccatctc
cgagaagtcatctgtacctctaaggatggagataggttttggcgaatgcctgaatgttat
atacgtgggaatactattaagtatcttcgagttcctgatgaggtgattgataaagttcag
gaagaaaccaagagccgctcagaccggaagccacctggtttaggacgtggaagaggaaga
ggtagggaggatggtggaagaccagtgaaaggcatcgggcgtggccttgatgatggaggt
gctaaggccactggtggaggccgtggcagaggtggttcaggaggaaagacaggtggaaac
agaggtgctggacgcggaaggggctga

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