Jatropha curcas (Barbados nut): 105642505
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Entry
105642505 CDS
T03922
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03018
RNA degradation
jcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105642505
09123 Folding, sorting and degradation
03018 RNA degradation
105642505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105642505
03041 Spliceosome [BR:
jcu03041
]
105642505
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105642505
mRNA degradation factors
5'-3' decay
Lsm complex
105642505
Spliceosome [BR:
jcu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105642505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105642505
NCBI-ProteinID:
XP_012082737
LinkDB
All DBs
Position
Unknown
AA seq
148 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGLGRGRGRGREDGGRPVKGIGRGLDDGG
AKATGGGRGRGGSGGKTGGNRGAGRGRG
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctttctctacttaagactgcacagggtcaccccatgttggtggaactgaaa
aatggggagacttacaatggacatttggtcaattgtgatacttggatgaacatccatctc
cgagaagtcatctgtacctctaaggatggagataggttttggcgaatgcctgaatgttat
atacgtgggaatactattaagtatcttcgagttcctgatgaggtgattgataaagttcag
gaagaaaccaagagccgctcagaccggaagccacctggtttaggacgtggaagaggaaga
ggtagggaggatggtggaagaccagtgaaaggcatcgggcgtggccttgatgatggaggt
gctaaggccactggtggaggccgtggcagaggtggttcaggaggaaagacaggtggaaac
agaggtgctggacgcggaaggggctga
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