Jatropha curcas (Barbados nut): 105642606
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Entry
105642606 CDS
T03922
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105642606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jcu03032
]
105642606
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105642606
DNA replication proteins [BR:
jcu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
105642606
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105642606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
PHD_2
Motif
Other DBs
NCBI-GeneID:
105642606
NCBI-ProteinID:
XP_012082874
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MLDSNSPSKTFLGVRFVLFGFDSIHERQVRAKLLNGGGVDAGQYSQSCSHLIVDKIVYDD
PLCVAARNDGKTLVTALWVDHSCDIGMAVDATSIMYRPPRDLNGIPGAKHLIMCLTGYQR
QDRDDIMTMVSLMGAQFSKPLVANKVTHLICYKFEGEKYELASKLKKIKLVNHRWLEDCL
RDWELLPEDNYNKSGYEMEMMEAEAKDSEEDVEDITVKQSSHQITYKSPHLKISTPKPCQ
LPKSTGELPKMPQILSEPEGLPSAVNKDMLLTPGRKHRIDTAVGIDNTCVSEVLACQVSG
ASNDAISVGLPDLQDRTPKSTKGCSDLESIPRSANKSNSDARFIAVSYVRKTPRKSPQKS
SSSILSGELDTKGSPKVQFSESILSGELGNVKGSPKLQFGESINMPSSKFEFAEEASVAG
SPLISCNQGLEPASLVDGLSKFSKHSPLGSGKHDNSMDDIVTVNAAQELNVDASSGKSSK
FKKKPFTEGLLFPESTAPEPEQNEGVKEKTPQTSFIGLGKSSLFDKSDDRDFGVEKSDLV
VSDAVLPQHQQQDKQVPSSFEGKSETEKCQTSDNLEELHEGNRNLVTKQGRKKTIARKTL
GSRPKLNSTANQKGSIYSNIVSLQNDLTIVLPGERTDHEKLYSANEPETSPDTFNVSAIN
EADKKNCTRTGDSFEIETNFMDDETEASEDKAVDLSHKADNEMELKQEGALHTTNDAASG
MEESGKEEKIAADQLQQKDESTCKVNGLKGKVSKGKRQPSGKARTKTKTVPPVPEQAKAT
EDLQGKDICKGNVEEKAIERKKTKPCTTSKTKSRNVDGKKSKSSMEVEKENKPIEGGGQD
INQPREPLGKTMVKSDKVSLKVKQKSWKNNPNCTPVREVSKQVKTEPVWFILSGHKLQRK
EFQQVIRRLKGKVCRDSHQWSYQATHFITPDPIRRTEKFFAAAASGRWILKTDYLTACSQ
SGKFLDEEPYEWHKNGLSEDGAINLEAPRKWRRLREKTGHGAFYGMRIIIYGECIAPPLD
TLKRVVKAGDGTILATSPPYTRFLKSGVDYAVVSPGMPRVDLWVQEFLQHEIPCIVADYL
VEYVCKPGYSLERHVLYNTHAWAEKSFENLLSRAEEIVEDFTPPSDTCNSDDTACQACGS
RDRGDVMLICGDESGSIGCGIGMHMDCFDPPLENIPEEDWFCPNCSGGSNSNSSAKRRRK
GTSSLNTKYF
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgctggattccaattctccctccaaaacgtttctgggtgtccgtttcgttctctttggt
tttgattccatccacgaacgccaggttcgagccaagctccttaatggcggtggagtggat
gctggtcaatacagccaaagttgttcccacctgattgtggataaaattgtttatgatgat
cctctatgtgttgcagcaagaaatgatgggaagactctggtcacagcactatgggttgac
catagttgtgatattggaatggcagtcgatgctacttcaattatgtatagacctcctaga
gatttgaatggaattccgggtgccaaacatttaattatgtgcttaactggataccagaga
caagatcgagatgacattatgaccatggttagcctgatgggtgcacagttttctaagcca
ttggtagcaaacaaggttactcatctcatatgctataaatttgaaggtgagaagtatgag
cttgccagtaaactgaagaaaataaagcttgtcaaccatcgttggttagaggactgctta
agggattgggagcttcttccagaagataattataacaagagtgggtacgagatggagatg
atggaagctgaagcaaaggattctgaggaggatgtggaggacatcactgtgaagcaatca
agtcatcaaatcacatataagagtccccatttaaaaatcagtactcccaagccttgtcaa
ctgcccaaatcaactggggaactgccaaaaatgccacaaattttaagcgagcctgaaggt
ctgccaagtgctgtgaataaggacatgctattaactcctggcaggaagcatagaattgat
actgcagtaggtattgataatacttgtgtttctgaggtgttggcttgccaggtttctggt
gcttccaatgatgctatttctgttgggttacctgatctacaagacagaactccaaagtct
acaaaagggtgtagcgatttggaatctatacctagaagtgccaataagtctaattctgat
gcaaggtttattgctgtaagttatgttaggaaaacaccaaggaaatccccacagaaatcc
tcatcatcaattttatcaggagaattagatactaaaggctctcctaaagtacaattcagt
gaatcaattttgtccggagaattgggcaatgtaaaaggctctcctaaattacagtttggc
gaatccattaatatgccttctagcaaatttgaatttgctgaggaagcaagtgtggctgga
agtccattaattagttgcaaccaaggattggaaccggcatctttggtagatggtctgtct
aagtttagtaaacactctcccctgggtagcggcaaacatgataactctatggatgatata
gttactgtcaatgctgcacaggagttaaatgttgatgcttcatcaggcaaatcatcaaaa
ttcaaaaagaaaccattcacagaaggtcttttgttccctgagagcacagccccagagcct
gaacaaaatgagggtgtgaaagaaaagaccccacaaacatccttcattggattgggaaag
tcaagtttgtttgacaaatctgatgatagagattttggggttgaaaaatctgatcttgtg
gtttcagatgctgtgctgccacagcatcagcagcaagataaacaggttccatcttccttt
gaaggaaaatcagaaacagagaaatgtcagacgagtgataatttggaagagcttcatgaa
ggaaataggaacttagttaccaagcaaggcaggaagaagacgattgccaggaagactttg
ggctccagaccgaaattgaatagtactgcaaaccaaaaaggatctatttattcaaatata
gtttctttacaaaatgatctcacaattgttctgcctggagagaggacagatcatgagaaa
ctgtacagtgccaatgagcctgagacatccccagacactttcaatgtttctgcaataaac
gaggcggataaaaaaaattgcacgaggactggagatagttttgagattgagactaatttt
atggatgatgaaactgaggcttcagaggataaggcagttgatttgtcacataaagcagat
aatgagatggaactgaaacaagagggggctctgcatacaacaaatgatgctgcttctggc
atggaagaaagtggaaaggaagagaagattgcagctgatcaacttcagcagaaagatgaa
tcaacctgtaaagtaaatggtttgaaaggcaaagtaagtaaagggaaaagacagccatca
ggtaaggcaaggaccaagacaaagactgtccctcctgtccctgaacaagcaaaagctaca
gaagatttgcaagggaaagatatttgtaagggcaatgtagaggagaaagctattgaaaga
aagaaaaccaagccatgtacgaccagtaaaactaagagcagaaatgtagatgggaagaag
tcgaagagctccatggaagtggagaaggagaacaaaccaattgaaggtggaggtcaagat
ataaatcagcccagagagcctcttggaaaaacaatggttaaatctgataaagtgtcattg
aaggttaagcagaagtcttggaaaaacaatcctaattgcacgccagtgagagaagtttca
aaacaagtgaaaactgaacctgtatggtttatactgagcggacataagttacagaggaaa
gaatttcagcaagttattaggcgattgaaaggaaaagtctgcagagattcccatcagtgg
tcataccaagcaacacacttcataacgccagatccaattcgtaggactgagaagtttttt
gctgctgcagcttctggaaggtggattcttaagaccgattatctaactgcttgtagtcaa
tcaggaaaattcttggatgaggaaccatatgaatggcataagaatggccttagtgaagat
ggcgcaatcaatttagaggctccaagaaagtggcggcgtttacgggagaaaacaggtcat
ggtgcattctatggcatgcgtattatcatttatggagaatgcatcgccccgcctttggat
actctgaaacgagtagtgaaggcaggcgatgggaccatattagcaacttctcctccttac
actcgattcctaaaatctggggttgactacgccgttgtcagccctggaatgccacgcgtt
gatttatgggtgcaagaatttctacaacatgaaataccgtgcattgttgctgattacttg
gtagagtatgtctgcaagcctgggtattctctggagagacacgtactatacaatacccac
gcttgggcagagaaatcatttgaaaacctgctgagcagggcggaagagattgttgaagat
tttacaccaccgtcagatacttgtaatagtgatgatacagcttgtcaagcttgcggatcg
cgtgatagaggagatgttatgcttatatgtggcgatgaaagtggttctataggttgtgga
ataggtatgcatatggactgttttgaccctcctcttgaaaacattccagaggaggattgg
ttttgtcctaattgtagtggaggcagtaacagcaatagttctgctaagaggagaagaaaa
gggacttcttcgttaaataccaagtatttttga
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integrated database retrieval system
