KEGG   Jatropha curcas (Barbados nut): 105642617
Entry
105642617         CDS       T03922                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 1 isoform X1
  KO
K11797  PH-interacting protein
Organism
jcu  Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:jcu04121]
    105642617
Ubiquitin system [BR:jcu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     105642617
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_SCAP WDR55 WD40_MABP1-WDR62_2nd NBCH_WD40 Bromodomain Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Agenet VPS8_N Beta-prop_IP5PC_F Auxin_resp
Other DBs
NCBI-GeneID: 105642617
NCBI-ProteinID: XP_012082885
LinkDB
Position
Unknown
AA seq 1659 aa
MDLWKCASSISKAPLNTSNNMVEKAQFEQGERNEIDVDLREVYFLILLFLSSGPCQRSYG
QFWNELLEHELLPRRYHAWFSRSDAHSGNDDDDGVSLPLSYDKLMDRYPHIEKDHLVKLL
KQMLRQIAPPVLCKVRDITPNAAAIPTLLGSGSFSLLDCDKSVDKQVEPLPAHLRWPHMQ
ADQVHGLGLREIGGGFAKHHRAPSIRSACYVIAKPSTMVQKMQNIKKLRGHRDAVYCAIF
DRSGRYVITGSDDRLVKVWSMETAFCLASCRGHEGDITDLAVSSNNALVASASNDFVIRV
WRLPDGLPISVLRGHTGAVTAIAFSPRPSSVYQLLSSSDDGTCRIWDARYSQSIPRTYVP
KPSDAVVGKNNGSSSNGPSSSNGPPSNQILCCAYNANGTVFVTGSSDTHARVWNACKLNA
DESEQPIHEMDILSGHENDVNYVQFSGCAVASRSLLSDTLKEENIPKFKNSWFCHDNIVT
CSRDGSAIIWRPRSRRSHGKSLRWTKSYHLKVPPPPLPPQPPRGGPRQRILPTPRGVNMI
IWSLDNRFVLAAIMDCRICVWNAADGSIVHTLTGHTASSYVLDVHPFNPRIAMSAGYDGR
TIVWDIWEGVPIRIYEIGLGRFKLVDGKFSPDGTSIVLSDDVGQIHLLNTGQGESQKDAK
YNQFFLGDYRPLIRDPAGNVLDQETQLPPHRRNIQDPLCDSSMIPYPEPYQIMFQQRRLG
ALGMEWRPPSIKFAVGPDFSLGLDYQMPPLEDLDRMIEPLPEFMDAIYWEPEIEILSDDS
DSEYNVAEECTSEGEQGSFCYSSASDPDCSMEDSDGEHSQRDGLRRSRRSKHKTKMVESS
GRRVKKRNMNERDGSIFGSTGAKKLKNGQKVSKRKSSKTKSSRPQRVAARNALNMFSKIS
GTSTDSDDEDDSENDTSSSESGMQDSDTQSNISYKYVQNMRDRYAREENIAEPPKFPESQ
SNAGNKKKLVLKFSLRDTKKPVSPKDSIINAERQNDQMNPSPTLHETEIELSSKDPGSSS
SDVFGLELSQDQHRVHITGTGYPQRVGDDIDESAVDNGNKIRWGEVKVRTSKYSRSGDVI
PGDAHKESRIDVNGDEQFEVDQDDARTEAGECGAQIEASEHGASASPLNRAPDVGDKIWS
DYDRNRNFDSLEANAYAAVNPCQGLKENPPKLKRLKLRTKGSLMGPQTPSNHTVMRAVND
LHQGTFDVMSESPPYQEQNQLMGMRAKIEGSSRSISSCNIREREKSHKSRADLEHLDRVM
EENSSDAMRRTRSMKMKATSREPNDVNHALRMKVGHKLVGTSNNDGIGLLPEGSAVNSRI
TVRSRSARNRRADNGSKYLISRNSSFPERKLSWLILSKHEDGYRYIPQLGDAVVYLRQGH
LEYIESTHSPEKGPWSSIMGHLSAVEICKVESLDYAPCPGSGDSCCKIILRFIDPSSCAF
GKSFKLTLPELINFPDFVVEKTRYDAAIGRNWTQRDKCLVWWRNENGEDGSWWDGRIVSL
DAKSSDFPDSPWERYTVCYNTDSHETHRHSPWELYDPKVPWEPPHIDSEITQKLLSSFDR
LEESVSRNQDKYGFQKLNEVSQKLDFFNRFPVPLCPEIIRSRLENNYYRSLEAVKHDVNI
MMENAQSYFAANAELSNKMRRLSDWYSNKLSKLHEGNSR
NT seq 4980 nt   +upstreamnt  +downstreamnt
atggacttgtggaagtgtgcatcttctattagtaaggcacctttaaatacttcaaataac
atggtggagaaggctcagtttgaacaaggagaaaggaatgagatagatgtagaccttaga
gaagtttactttctgattttgctttttctatcctctgggccttgccaaaggagttatgga
caattttggaatgagcttttggaacatgaacttctgccaagaagatatcatgcctggttt
tcaagaagcgatgcacatagtgggaatgatgatgatgatggcgtctctcttccattaagt
tatgataaattgatggataggtatcctcatattgagaaggatcatttggtaaagcttctg
aagcaaatgctgcggcagattgcacctcctgtgctttgcaaggttcgagacattacacca
aatgcagctgccattcctactttactgggatccggttccttttcgcttctggattgtgac
aaaagcgtggataagcaagttgagcctctgcctgcgcacctgcgttggcctcacatgcag
gctgatcaggtgcatggtttgggattaagggaaataggaggaggttttgcaaaacaccat
cgagccccatccattcgttctgcatgctatgtgattgctaagccatcaaccatggtgcaa
aagatgcaaaacattaagaagttgaggggacaccgtgatgctgtctattgtgctatattt
gatcgctcagggaggtatgtaattactggttcggatgatcgtcttgtcaaggtttggtca
atggaaactgcattttgcttggcaagctgccgagggcatgaaggtgatattacggacttg
gctgtaagttcaaacaatgctttagtggcatctgcttcaaatgattttgttatccgcgtg
tggcgcttgcctgatggattgcccatatcggtcttgcgggggcatactggagctgttact
gctattgcatttagtccccggcctagctctgtctaccaacttttatcgtcatcggacgat
ggaacttgtcgaatctgggacgctagatattcccaaagcattccacgaacttatgtgcca
aaaccttcagatgctgttgttggtaagaacaatggatcatctagtaatggaccctcctcg
agcaatggtccaccaagcaatcagatattatgttgtgcttacaatgccaatggaactgtc
tttgtcactggtagctctgacactcatgcaagggtttggaatgcctgtaaacttaatgca
gatgagtcggaacaaccgattcatgagatggatatattatctggtcatgagaatgacgtc
aattatgttcagttcagtggctgtgctgtggcttcaagatctttgttgtctgacacttta
aaggaggagaatatccccaaatttaaaaattcctggttctgtcatgacaacatagttacc
tgctctcgtgatggtagtgcaattatatggaggcctagatcacgcagatcccatggaaaa
tctctacggtggacaaagtcatatcatctgaaagttccacctcccccattgcctccacaa
cctcctcggggaggtccacggcagagaattcttccaacccctcgcggtgttaatatgatt
atatggagcttggataatcgctttgtgcttgcagctataatggattgtagaatatgcgtt
tggaatgctgctgatggtagcatagtacatactcttactggtcacactgcatcatcttat
gtattagatgttcatcctttcaatccacggatagctatgagtgccgggtatgatggaagg
actatagtctgggatatatgggagggcgtccctattcgcatatatgaaattggacttgga
cgtttcaagttggtcgatgggaagttttctccggatggaacatcaatagtcctttcagac
gatgttgggcagatacatttgctaaacacaggccaaggcgagtcccaaaaggatgcaaaa
tataatcagttcttccttggggattatcggccccttatcagggatcccgctgggaacgtt
cttgatcaggagacacagcttcctccacatcgtaggaacattcaagatcctctttgtgat
tccagcatgattccatatccagaaccttaccagattatgttccagcaacgtcgacttggt
gctcttggaatggagtggcgtcctccatccataaaatttgctgttggtcctgatttcagt
ttaggtctggattatcaaatgcctcctttggaagatttggatagaatgattgaaccactg
ccagaatttatggatgcaatttattgggaaccggaaatcgaaatcctaagtgatgacagt
gattcagagtataatgttgcggaggaatgcaccagtgaaggtgagcaaggtagtttttgt
tacagctctgccagtgatccagattgcagcatggaggacagtgatggtgaacatagtcag
agagatggccttcgcagatcaagaagaagcaaacacaaaactaaaatggttgagtcctct
gggaggcgtgtcaagaagaggaatatgaatgagcgtgacgggtcgatatttggaagcact
ggagctaagaaattaaaaaatggccagaaagttagtaagaggaagtcttcaaagacaaag
tcatcaagacctcagcgtgtggcagcacgcaatgctctaaatatgttctccaaaattagt
gggacatctacagatagcgatgatgaagatgactcagaaaatgatacatccagcagtgaa
tcagggatgcaagattcagacactcaaagcaacatatcttataaatacgtacagaatatg
cgagatagatatgcaagagaagaaaatatagctgaacctcctaagttccctgaatctcaa
tcaaatgctggaaataaaaagaaattagttttgaagttttcattgcgcgatactaaaaag
cctgtctctccaaaagacagcataatcaatgctgagagacagaatgatcagatgaatcca
tctccaacacttcatgaaactgaaattgaattaagctctaaagatccaggatcatcttcc
tcagatgtgtttggtttggagctgtcccaggaccagcatagagtccatattactggtaca
gggtatcctcaaagggttggggatgacatagatgaatctgcagttgacaatggaaacaaa
atcagatggggagaggtcaaggttcggacatccaagtattctagatcaggagatgtgatt
ccaggtgatgcacacaaggaaagcaggattgatgttaatggggatgaacagtttgaagtg
gatcaagacgatgcaagaactgaagctggtgaatgtggtgcacaaattgaagcaagtgaa
catggtgcttctgcaagccctttgaatagagctcctgatgtgggagacaagatttggtcc
gattatgacagaaacagaaatttcgattcattggaagcaaatgcatatgctgctgtaaac
ccttgtcagggattgaaagaaaaccctcccaagctaaaaagattaaaattaagaacaaaa
gggagtttgatgggtccacaaactccttccaaccatacagttatgagagcagtgaatgat
ttacatcaaggtacatttgatgtaatgtctgaaagtcccccttaccaagagcaaaatcaa
cttatgggaatgcgagcaaaaattgaaggttctagcagatcaatttcttcatgcaatatt
cgtgaaagggaaaagtcacataagagtagggctgatttagaacatctggatcgtgttatg
gaagaaaattcttcagatgctatgcgtagaacaagatcgatgaagatgaaggcaacttca
cgggagccaaatgatgtgaaccatgccttgaggatgaaagtgggtcataaattggttggg
acatcaaataatgatggtattgggctcctacctgaaggaagtgcggtcaattcgagaatt
acagtaagatcaagatctgctagaaacaggcgagcagataatggctcaaaatatttgatt
tcacggaattcaagtttccctgagaggaaactgtcatggcttatcttgtcaaaacatgaa
gatggctaccgttacatccctcagctgggagatgcagtagtgtatctgagacagggccat
ctagagtatattgaatcaactcactcaccagaaaaaggtccttggagttcaattatggga
caccttagtgctgtggaaatttgcaaggttgaaagccttgattatgccccatgtccgggc
tctggggatagttgctgtaaaatcatactcagatttatagatccttcatcttgtgcattt
ggtaaatcattcaagttgaccttgcctgaactgattaattttcctgactttgttgttgag
aaaacgcggtatgatgctgctatcggtagaaattggacccagagagataaatgcctggtt
tggtggaggaatgagaatggggaagatggtagctggtgggatggtagaattgtttctttg
gatgcaaaatctagtgattttcctgacagtccttgggagagatacacggtatgctacaat
actgattcacacgaaacccatcgacacagtccctgggaactgtatgatcctaaagtgcca
tgggagccccctcatattgattctgagatcactcaaaagctgctatcttcttttgataga
ttagaggagtcagtgagcagaaatcaggataaatacggattccaaaagttgaatgaagtt
tctcaaaaattggatttctttaacaggtttccagttcctctctgtcccgaaattatccga
tcaaggttagaaaacaactattaccggagcttagaagcagtgaagcatgatgtaaatata
atgatggagaatgcccaatcttattttgcagcgaatgctgagctatcaaacaagatgagg
cggctatctgattggtattcaaacaaactgtcaaaactccatgaaggcaattctcgatga

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