Jatropha curcas (Barbados nut): 105642759 Help Entry 105642759         CDS       T03922                                  Name (RefSeq) endoribonuclease Dicer homolog 1   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism jcu  Jatropha curcas (Barbados nut) Brite KEGG Orthology (KO) [BR:jcu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:jcu03036]     105642759 Chromosome and associated proteins [BR:jcu03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     105642759    microRNA pathway     RISC loading complex      105642759 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer dsrm Helicase_C DND1_DSRM DEAD ResIII PAZ Dicer_dsRBD Dicer_PBD SNF2-rel_dom SWI2_SNF2 Motif Other DBs NCBI-GeneID:  105642759 NCBI-ProteinID:  XP_012083084 UniProt:  A0A067K9A8 LinkDB All DBs Position Unknown AA seq 1986 aa AA seqDB search MTDGETRVSGTLAGGGPSYWLDACEDISCDLIDNFVDFDTSIVQGSIDDTSNQDNLVNDF FGGIDHILDSIKNGSGLPLIADSNNTSSNGTPAIVGNGIQDCNVGDGWFKNETAAFCTST NENTPLQSNGNGKINFESNGQVENFSNGLNSLDRRVEESLNSLNSSIKENGNKGSVEGLR ERGFDGEERCCKRARITSYKNDRDRQYSSRGQYDPRDRDRSSNRKRLRDWDDIDRRDRDR DHPRRNRYNGGSRRDGRDRDWKDREQRGYWERDRSGSNEMVFRIGTWEADRNKEGKETND KDHECNGKQEKKSEESKEKLPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIK SLCNDLQRQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQRE FDSKQVLVMTAQILLNILRHSIIKMEAIDLLILDECHHAVKKHPYSLVMSEFYHTTQKEK RPSVFGMTASPVNLKGVSSQFDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVE YDKAASLWSLHEQLKQMEVAVEEAAQSSSRKSKWQFMGARDAGAKEELRQVYGVSERTES DGAANLIQKLRAINYALGELGQWCAYKVAQSFLMALQNDERANYQLDVKFQESYLEKVVS LLQCQLTEGAVADKEAKSPDNENGIAQDGTDPDEIEEGELPDSHVVSGGEHVDVIIGAAV ADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVLAELPSLSFVRCASLIG HNNSQEMRTSQMQDAIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS RGRARKPGSDYILMVERGNLSHGAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDT VPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCK LQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEREKVDQ NDEGEPLPGTARHREFYPEGVANILQGEWILCGRDGCNSSKLLHLYMYAVKCVNSGTSKD PFLTQVSEFAVLFGNELDAEVLSMSMDLFIARTIITKASLVFRGSINITENQLASLKSFH VRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVGDKSVDPVKEIDWDLVEKIIRTDAWRNPL QKARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLV PKRDGIAVEKVELLKGKLIMADSCVSAEDLVGRIVTAAHSGKRFYVDSIRYDMTAENSFP RKEGYLGPLEYSSYADYYKQKYGVHLIFKQQPLIRGRGVSYCKNLLSPRFEHSELNEGES EEILDKTYYVFLPLELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDIINYPVPAS KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMV LYQYALNKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDNSLFDQEKSLPEDKPGVDQ ANDGYEDDEIEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEDGKNAANHLMKWIGIQ VDFDREEIDSAIRPSNVPESVLRSIDFDTLEGALNIMFKDRGLLVEAITHASRPSSGVSC YQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH GSSALEKQIRDFVKEVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTAV VWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLATVEVFIDGIQIG VAQNPQKKMAQKLAARNALAVLKEKETAEAREKGDENGKKKKNGNQTFTRQTLNDICLRR NWPMPSYRCVNEGGPAHAKRFTFAVRVNTTDRGWTDECVGEPMPSVKKAKDSAAVLLLEL LNKWYS NT seq 5961 nt NT seq  +upstreamnt  +downstreamnt atgacggacggtgagactagggtttcagggactttggctggtggcggcccctcttactgg ctggatgcctgtgaggacatctcctgtgatcttattgacaattttgttgattttgatact tcaattgttcaaggttccattgatgatacttcgaatcaagataatctcgttaatgatttc tttggaggtattgatcacattcttgatagcatcaagaatggtagcggcttgcctctaatt gctgacagcaataacaccagtagtaatggtacaccggctattgttggcaatggaattcag gactgtaatgttggggacgggtggtttaagaatgagacagctgccttctgcacaagtaca aatgaaaacaccccattgcaatcaaatggcaatggtaaaatcaattttgaaagtaatggc caggtggagaattttagtaatggattgaattcattggatagaagagtggaagagagtttg aattcgttgaacagttctattaaggaaaatgggaataagggcagtgtcgaggggctgagg gaacgaggttttgatggtgaagaaaggtgttgtaaaagggctaggattaccagctacaag aatgatagagatagacagtactctagtcgagggcagtatgatccaagggatagggataga agctctaacagaaagagactgcgggattgggatgatattgataggagggacagggatagg gatcatcctcgcagaaataggtataatggtggctctaggagggatggtagagatagggat tggaaggatagagaacagaggggttattgggagagggaccgttctgggtccaatgagatg gtttttcgcataggtacttgggaagctgaccgaaacaaagaaggaaaggaaaccaatgac aaagatcatgagtgtaatggaaagcaagagaagaaatctgaggagtctaaggagaaactc cctgaggagcaagctcgccaatatcaattagatgttcttgaacaagctaagaagaaaaac actattgcttttcttgaaactggtgcagggaagaccctcattgcggtacttctgatcaaa agcctttgtaatgacttgcaaaggcagaacaagaaaatgcttgctgtatttttggttccc aaggttccgcttgtttatcagcaagccgaagtcattcgtgagcgtactggttaccaagtg ggccattactgtggtgaaatgggtcaagatttctgggatgctcgaaggtggcagcgtgag ttcgactcaaaacaggttttagtgatgacagcccaaattctgttgaacattctgagacac agcataattaaaatggaagcaatcgatctccttattctggacgagtgtcatcatgctgtg aagaaacatccatattctttggtgatgtctgagttttatcatacaacacaaaaggaaaaa agaccctctgtttttggaatgactgcttctcctgttaacttaaagggtgtttcaagtcag ttcgattgtgcaataaaaatccgtaaccttgaaagtaaactagattccatagtttgtaca ataaaagaccgcaaagaactggaaaaacatgtgccaatgccatcggaaattgtggtggag tatgacaaagcagccagcttatggtcccttcatgaacaattaaagcaaatggaagtggct gttgaagaagctgcacaatcaagttcacgaaaaagtaaatggcaatttatgggagctaga gatgctggggctaaggaagagctgcgccaagtttatggtgtctctgaaagaacagaaagt gatggggcagctaacttgattcaaaagttgagggcaatcaattatgcactcggtgaactg ggtcagtggtgtgcttacaaggttgcgcagtcctttctgatggctttacaaaatgatgag agggcaaattaccagcttgatgtcaagtttcaggaatcctacctggaaaaagttgtttca ctcttacagtgtcaattaacagagggagctgtggcagacaaggaagcaaaatctcctgac aacgagaatggaattgctcaagatgggactgatcctgatgagattgaagaaggggagctt cctgacagtcacgttgtctccggtggagagcatgtggatgtgataataggggctgctgtt gctgatggaaaagtgaccccaaaagtgcagtcactaataaaaatacttctcaaatatcag cacacagaggattttcgtgcaatcatctttgttgagcgagtagtagcggctttagttctt ccgaaggttcttgcagagcttccatctctgagtttcgttagatgtgcaagtttgatcggg cataacaatagtcaagaaatgcggacatcgcagatgcaggatgcaattgccaaatttcga gacggtcgtgtgacattgttagttgctaccagtgttgctgaggaaggactagatattagg caatgcaatgttgttattcgctttgatcttgcaaaaactgtactggcatatattcagtct agaggtcgtgcaagaaagcctggttcagattatatcttgatggtggagaggggtaatctg tctcatggagcattcttaaggaacgctaggaatagtgaggagaccttgcggaaagaagca attgagagaactgaccttagtcaccttaaggatacatcaagattgatttctgttgataca gtaccaggaactgtgtaccaagtggagtctactggtgctgttgtgagcttgaattctgct gttgggcttatccatttttattgttctcagctaccaagtgataggtattcaatacttcgt cctgagttcattatggagagacacgagaagccaggaggtccaacggaatattcatgcaag cttcaacttccttgcaatgcaccatttgagaaacttgagggtcctgtttgcagttcaatg cgccttgcacaacaggctgtttgtttggctgcttgcaagaagctccatgagatgggagca tttactgacatgctcttgccagacaagggaagtggggaagaaagagaaaaggttgaccaa aatgacgaaggtgaaccacttcctgggactgctaggcatagggagttctatcctgaaggt gtagccaatatactccagggagaatggatcttatgtggaagagatggttgcaatagctcc aaattacttcatctttatatgtatgctgtaaaatgtgtaaacagcggcacttcaaaagat ccattcttaacccaagtttcagaatttgctgtgctttttggcaatgagctggatgcagag gtcttatcgatgtcgatggatctatttatcgctcgaaccattatcactaaggcatctctt gtcttcagggggtcaataaatattactgaaaatcagctggcatcccttaaaagttttcat gtgagattgatgagcattgtactggatgtggatgttgaaccttccaccactccatgggat cctgcaaaagcatatttgtttgtccctatggttggcgataagtctgtagatcctgtaaaa gaaattgactgggatctagttgaaaaaataattagaacagatgcatggaggaatcccctt cagaaggctcggccagatgtttaccttggtacaaatgagaggacacttggtggagataga agggagtatggatttgggaaattgcgtcatggcatggcttttggacagaaatctcatccc acctatggtattagaggagctgtagcacaatttgatgttgtgaaagcttctggattggtt cctaaacgggatgggattgcagtggaaaaagtggagttactcaaaggcaaactgataatg gctgatagttgtgtcagtgctgaagatttggttgggagaatcgtaacagctgcacactct gggaaaagattctatgtagattcaatacgctatgacatgactgctgaaaattcattccca aggaaagagggttatcttggtccgttagagtatagctcatatgctgattattacaagcag aagtatggagtccatttgatttttaagcaacagcctttaataagaggacgtggtgtttca tactgcaagaaccttttatctcctcgatttgaacactcagaattaaatgaaggtgaatct gaagagattcttgacaaaacatactatgtttttcttcctcttgagctatgtttggtacac cctcttcctggatcacttgttcgaggtgcccaaagattgccatcaataatgaggagggtc gaaagcatgcttctagcaattcaacttaaggatataataaattatccagtccctgcttca aagatcttggaagccttgactgcagcttcatgccaagagacattctgctatgaaagagca gaacttctaggagatgcttacctcaaatgggttgtcagtcgatttctttttcttaaatat cctcagaaacatgagggtcaactcactaggatgagacaacaaatggtgagtaacatggtt ttgtatcaatatgccttgaataagggactccaatcttacatccaggcagatcgttttgct ccatctagatgggcagctcctggggtgttgcctgtctttgacgaagatacaaaagatggg gataactctttatttgatcaggaaaaatctcttcctgaggataaaccaggagtcgaccag gctaatgatgggtatgaagatgatgaaattgaggatggcgagcttgagagtgactctagt tcttatagagtcctttctagcaagactttggcagatgttgttgaagcattgattggtgtt tattatgttgaagatggtaagaatgcagcaaaccacctcatgaaatggattggtattcag gttgattttgatcgtgaagagatagattctgcaataaggccgtctaatgttccagaaagt gtacttagaagcattgattttgataccctagaaggtgccctaaatatcatgttcaaagat cggggcctcttggtagaggccatcactcatgcatcacgaccatcttctggagtatcctgt taccaacgattagaatttgttggggatgctgtcctagatcatctcattacaaggcacttg tttttcacgtacacaaatcttcccccaggtcgtctaacagatttgcgagctgctgctgta aataacgaaaattttgcacgtgtagcagttaaacataagctccatgtgcatcttaggcat gggtcaagtgcccttgaaaagcagatcagagactttgtgaaggaagttcaagatgaatta tcaaagccaggtttcaattcctttggcttgggagattgcaaagctccaaaggttcttgga gacattgttgaatctattgcaggtgccatcttcctggacagtggacgagatactgcagtt gtttggaaggtatttcaacccttgttgcatccaatggtcactccagaaacacttcccatg catcccgtcagggaactgcaagaacggtgccagcagcaggctgaaggcttggaatacaaa gccacacgaagtggcaatctggctactgttgaagttttcattgatggtatccagataggt gttgctcagaatccgcaaaagaagatggcccagaaacttgctgctaggaatgcacttgct gttttgaaagagaaggaaacagctgaagccagggaaaagggtgatgagaatgggaagaag aagaaaaatggtaaccaaacatttaccaggcaaaccttaaatgatatttgcttgcgaaga aattggcctatgccctcttatcggtgtgtgaatgagggtggccctgcacatgcaaagagg tttacgtttgcagttcgggtgaatactactgatcggggatggaccgacgaatgtgtggga gagccaatgcctagcgttaaaaaggccaaggactctgctgcagttctcctcttggaactt ttgaacaaatggtactcatga

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