Jatropha curcas (Barbados nut): 105642811
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Entry
105642811 CDS
T03922
Name
(RefSeq) serine/arginine-rich splicing factor RS31
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105642811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jcu03041
]
105642811
Spliceosome [BR:
jcu03041
]
Common components
Common spliceosomal components
SR proteins
105642811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_3
SET_assoc
RNA_bind
RRM_5
RRM_Nup35
DUF1866
SpoIISA_toxin
RRM_8
Motif
Other DBs
NCBI-GeneID:
105642811
NCBI-ProteinID:
XP_012083147
UniProt:
A0A067K840
LinkDB
All DBs
Position
Unknown
AA seq
246 aa
AA seq
DB search
MALRPVFVGNFEYDTRQSDLERLFSKYGRVDRVDMKSGFAFVYFEDERDAAGAIRGLDNT
PFGYDRRRLSVEWARGERGRHRDGSRSMANQRPTKTLFVINFDPIRTRVEDIKRHFERYG
EVLHVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGEKGDRYDSPRR
GSYYGRSPSPVYRRRPSPDYGGARSPVYDKYNGPAYDRRRSPDYGRNRSPEYGRYRSRSP
IRRSRT
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcggcctgtgttcgtcggaaattttgagtatgatactcgccagtctgacttg
gaacgtctcttcagcaagtacggaagggtggatcgagtggacatgaaatctggttttgct
tttgtttattttgaggatgaacgtgatgctgcaggtgctatacggggacttgacaataca
ccattcggttatgataggcgcaggctgtcagtggaatgggctaggggagaacggggtcga
catcgtgatgggtcccgatcaatggcaaatcagaggcccacaaagactctttttgtgatt
aattttgatccaatccggaccagagttgaagatataaagagacattttgaacgatatgga
gaggttcttcatgtcagaattcgtaggaactttgcatttgtacagtttgagacgcaggaa
gatgctaccaaggccctcgagtgcacacacatgagcaaaatattggacagggtggtttct
gttgagtatgctttgagggatgatggtgagaagggagacagatatgatagccctagaaga
ggaagttattatgggaggtctccaagtcctgtgtatcgtaggcgacctagtcctgactat
ggtggagctcgcagcccagtgtatgataagtacaatggcccagcttatgaccggagaagg
agtcctgattatggtaggaatcgaagtcctgagtatggtagatatcgcagccgatcacct
attagaagatcaagaacatga
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