Jatropha curcas (Barbados nut): 105642828
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Entry
105642828 CDS
T03922
Name
(RefSeq) uncharacterized protein LOC105642828 isoform X1
KO
K24155
rabconnectin-3a
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105642828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jcu04131
]
105642828
Membrane trafficking [BR:
jcu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105642828
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
105642828
RAVE complex
105642828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_EML
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
EIF3I
Motif
Other DBs
NCBI-GeneID:
105642828
NCBI-ProteinID:
XP_012083183
LinkDB
All DBs
Position
Unknown
AA seq
2526 aa
AA seq
DB search
MPETSYSSQNSTSTTDPTDHLPLSIFRSDIIPPAPTSSQSTIDWLPDFAGYAWIGYGASS
LLVISHLPSSLSSDEFLSGPILRQVFELSGNHSSHVTAVSWSPVTPSIGELAAASGNCIY
VFSHDSASFKGSFVWSQNAVLLQSTKVEAVKWTGSGDGIIAGGIDVILWRRKDKSWEIAW
KFKRDEPQNLVSATWSIKGHVATAAYPSKLDIKGSSNMSKCVFVSYCDSISEYAKFELRH
PQPVSMIQWRPSTGRQSQGDANYPPRHILLTCCLDGTARLWTEVDNGKVRKLAKDNSDRK
ATRRSFCVAAVIEINQVLKGSLGMDIFLNWAAESSGIYRTGEGTKQFLSPETYGHNRVGK
CEWLIGFGPGTTITFWAIHCLDDISPMRFPRVTLCKRKELQDLEGGHLHGSAFSNFKDSL
LLSKVVISRNCSSGPPDICSLVHLLPSNSFIWSLLHTERSGNIETTSLNNLEICKYFSRS
ANGVLDGRHAGKILQVAVHPCIYELGLAASLDSNGLLLFWSVSNVSNHNFGLSTLVPTWK
LCGSFQTNYSCSKYTSLKWAPSTLDEDYILLMGHARGIDCFVVKVPQIGGGGDIICHFIS
TIPLIRDGTYEDGPPNIFVIPLPSTCNKTFKYNKFMLLGVWMEHFQALSWEVTLHSYDLP
EASCDCNFDDQNSTMLWKWKFESSFADKRYCLGVNPCSSQLPDTYSDEQITSFSVVGPGN
SIPMHGSLGGTNICCSVPAYVMATGCSDGSLKLWRSNSSKMSTPYILWELVGKLVAHQGT
VRALCLTDCGRKIATISAGSDGTSKLHVWDSVHLIGAGSFVLEDILCIDREVVSLNWLAL
GNGQLLLGVCTQNMLQVYAQKHSGGQTFSNIGESLNLQNWLCIAVFHTSPAIRYFLWGPQ
AAAIIVHDNYFSLLSQWLFLVDNRERKDKDILSSIFTDFAADVSDLGEPSVPVKTNGKKD
CLSSNVFEAKSQLKHGLCNVVGFWSLVEVAEKLKGMIPVYHPEALLMNMYSGNWKRAYAS
VRHLVQCLHSGYYSEKRCCSGKNSHVAPQILLSNYFEGVLFKDSMDKRFQWGADARLPAS
SSQFSLYDAKSDASSDVFISSTTISELRGFLEPLEKMYDLAAVSNAEKLQILAIVDLLAE
IQQSASAYGNLDEPGRRFWVALRFQQLHFSRSFGKLSSVEELIVDTSLMCWAFHSDCQEI
LLSSFLPNEPSWKEMQTLGVGFWFTNVAQLRTRVEKLARMQYLKNRDPKDCALLYIALNR
LQVLAGLFKISKDDKDKPLVGFLSRNFQEEKNKAAALKNAYVLMGRHQLELAIAFFLLGG
DNYSAITVCAKNLGDEQLALVICRLIEGRGGPLEHHLITKFILPSAAERGDYWLASLLEW
ELGNYYQSFLCMLGFQRSSLTERSALSSNHAAFMNPHIGLYCLKLASNNCMRNATGDQNA
AILSRWATFMAATAFNRSGLPFEALECLSSSLVTFESEDQERISDVNHSQILHGILKPSA
NDSHNWLSNNVALQLESSAKLELALQYFSKLMGEHPSWPDATLGSVQPSTRFKEGEIYQY
DKLLENFQDKLYTGLSKFEQKFSVASSCLIKMILVWLCNNGLLFIGYDLLLNYISRDRLQ
DDSHLFGDLVLYPLLCKALLKAIKDFSLFLSRFIVASSITCLQPKSCYIENDTSVEVKST
WSDTQGHYFQGIMPTLWSLRTAIRISSGFLSEDMTTRFFVIIDLYEFSVHFASAWLRRNS
KGLLLMVQPLLIAFTDGHNPCEVDMANLKNILNHIAELLASNISVDDARLGLNVTEFMPF
KLDGETVNLFSEVEKWHIIGACLWQHMARLMKHKLDLLSINVDHSSFSGVSHCPASSSMN
FAYDNNMTEQIASLSLILAKLLKNTILHVSSYHVKVFGSLLQLKVENGLHIPTLAWLQES
NLYQAKVNNQDASADIINSKDELSTFNILWDTCADPNIISKGFAEEKINWSQFVHHRSSH
GWNELYESIREEHKTKEVLDHEVRLSDNHSSGEVRSSTKGLLKNGRSFLTSWQKDATITK
EVPHFQNAKEIYKRDGELLEALCVNSINEGQAAIASNRKGIIFFSWDGGIPFDDQSEYTW
SNADWPTNGWAGIESRPVPTCVSPGAGLVRKKGAHLGLSRETLGMGSLARPRKDLRGGGA
FGIPGYEGTGASGLGWKVQEDFEEFVDPPATVENISTRAFSSHPSRPFFLVGSSNTHIYL
WEFGKDKATATYGVLPAANVPPPYALASISALQFDHCGHRFATAALDGTVSTWQLEVGGR
SNIRPTESSLCFSGHALDVTYVTSSGSVVAAAGHSSNGVNVVVWDTLAPPTTSRASITCH
EGGARSISVFDNDIGSGSISPLIVTGGKGGDVGLHDFRYIATGKTKRNKHFDNGDGSNNM
PSNAEMQAGVGNKVGDQNQNGMLWYIPKAHLGSVTKICTIPNTSLFLTGSKDGDVKLWDA
KVAKLVYQWPKLHERRTFLQPSTRGFGGVVRAAVTDIQVVSHGFLSCGGDGSVKLVQLKD
YPHEKL
NT seq
7581 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaacgagctattctagccaaaactcgacctccactactgaccctactgatcat
cttcctctctctatctttagatccgacatcatcccacccgcaccaacttcatcccaatcc
accatagactggctaccagactttgccggttacgcatggatcggatatggagcctcctct
ctcttagtgatttcgcacttgccatcctccctctcttccgacgaatttctcagtggcccc
attctccgccaagttttcgagctttctggcaatcattcatcccacgtcactgccgtttca
tggtccccagtaacgccgtcgataggagagctcgctgctgcgtcaggcaactgcatatat
gtgttctcacatgattccgctagcttcaaaggttcttttgtttggagccagaatgcagtg
cttttacaatcgacaaaggtggaagcagtcaaatggactggctctggggacgggataatt
gctggtggaattgatgtgattttgtggagaaggaaagacaagtcatgggaaatagcttgg
aaatttaaaagagatgagcctcaaaatctggtttctgcaacctggtcaattaagggacat
gtggcaactgctgcttatccgagtaaattggatattaaaggatctagcaatatgagtaag
tgcgtgtttgtgtcttattgtgatagcatatctgaatatgcaaaatttgagctgcgccat
ccacagcctgtctcaatgattcaatggaggccatcaacaggaagacaatcacagggagat
gcaaattatccgccaagacacattctactaacttgctgccttgatggaactgctaggcta
tggacagaggtagataatggaaaggttagaaagttagccaaggacaatagtgatcgcaaa
gcaacaaggaggtctttttgtgttgctgctgtaattgagataaatcaggtgttgaaagga
agtttgggcatggatatatttttgaactgggcggcagaaagtagtggtatatatagaact
ggagagggaactaagcagttcttatcccctgaaacatatggtcataatagagttggcaaa
tgcgagtggttaattggctttggtccaggaacaacaattactttctgggccattcactgt
cttgatgacatctcgcccatgaggttccctcgtgttacactatgtaagagaaaagaattg
caggaccttgaaggggggcatcttcatggatctgcattttcaaactttaaagattcatta
cttcttagtaaggttgttatctcgaggaattgctcgtctggccctcctgatatatgctct
ttggttcatttattaccttctaattcctttatctggtctctgttacatactgaaagatct
ggtaatattgagaccacatccttgaacaatttagaaatatgcaagtacttttcacgttct
gctaatggagttttagatggacgacatgctggaaaaatcttacaagttgctgtacatcct
tgtatttatgaacttggattggctgcttctttggattctaacggattgcttctattttgg
tctgtttcaaatgtttcaaaccataattttggcctttcaacgttggttccaacatggaag
ctttgtggaagctttcaaactaattattcgtgttctaagtatacaagcctgaagtgggca
ccttctacgttagatgaagactatatacttcttatgggacatgccagaggaatagattgc
tttgtagttaaggttcctcaaattggaggaggaggagacataatatgccactttatctcc
accatacctctaattagagatggtacttatgaggatggtccccctaatatctttgtgata
cctcttccttctacctgtaacaagacattcaagtacaataaatttatgcttttgggggtg
tggatggagcactttcaggctctttcatgggaagtaactttacactcctatgatttaccg
gaagcttcctgtgactgtaattttgatgatcaaaatagtactatgctctggaaatggaaa
tttgaaagttcttttgctgataaaagatattgtcttggtgtcaacccttgctcgtctcaa
ttgccagatacttactctgatgagcagattactagtttttctgtggtaggtccaggtaat
tcgattcctatgcatggaagtctaggtggcactaacatttgctgtagtgttccagcctat
gttatggctacaggctgctctgatggtagcctgaaactgtggagaagtaactcttctaaa
atgtctactccttatatactgtgggaacttgtaggcaaattagttgctcatcaaggcact
gttcgtgctctgtgtttgactgattgtggtcggaagattgctaccatctctgcagggagt
gatggcactagcaagcttcacgtatgggacagtgtacaccttataggagctggaagtttt
gtgttagaggatatattatgtattgacagagaagttgtttctttaaattggctggcttta
ggcaatggtcagttacttcttggggtttgcacgcagaatatgttgcaggtatatgctcag
aagcattctggtggtcagacattctcgaacattggagaatctttgaacctgcaaaattgg
ttatgcattgcagtttttcatacttcccctgctattcggtacttcctttggggcccccag
gctgcagccatcattgttcatgataattactttagtctacttagtcaatggttgtttctt
gtagataatagagaacgaaaagataaagacattctttcttcaatattcactgattttgct
gctgacgttagtgatcttggagaaccatcagttcctgtgaagactaatggaaaaaaggat
tgcctatctagcaatgtttttgaggccaagtctcaattaaaacatggtttgtgtaacgtg
gttggtttttggagcctggttgaagtagcagagaagttgaagggaatgatacctgtttac
catcctgaggcgctacttatgaatatgtactcaggcaattggaaacgtgcttatgcatct
gtgaggcatcttgttcaatgtcttcattctggttattattctgagaaaaggtgctgctct
ggaaagaatagtcatgttgctccacagattcttttgtcaaattattttgaaggagttctc
tttaaagattcaatggataagagatttcagtggggtgctgatgcaagattaccagcctca
tcttcgcagttttctctgtatgacgccaagtctgatgcttccagtgatgtatttatttca
tctacaacgatatctgaacttcgtggttttctagagcctcttgagaaaatgtatgatttg
gcagctgtatccaatgctgagaagttgcaaattcttgcaattgtagaccttcttgctgaa
attcagcaatctgcttctgcctatggaaatctcgatgaacctgggcgaaggttttgggtt
gcattaaggtttcagcagctacatttttctagaagctttggcaaattatcatctgtagaa
gaattgattgttgacactagtctaatgtgctgggccttccactctgactgccaggaaatt
ttgttgagttcttttcttccaaatgaaccatcatggaaagaaatgcagactcttggtgtt
ggattctggtttaccaatgttgcgcaactacgcacaagggtggagaaattagcaagaatg
cagtatctgaaaaacagagatcccaaagattgtgcccttttatacattgcattgaataga
cttcaagtcttggctggtcttttcaaaatcagcaaagatgacaaagacaaacccttggtg
gggttcctttctcgcaattttcaggaggagaaaaataaagcagctgctttaaaaaatgct
tatgtcttgatgggaagacatcagctggagcttgctattgctttctttctacttggagga
gataattattctgcaatcacagtttgtgcaaagaatcttggagacgaacaacttgcacta
gtaatttgtcggctcattgagggtcgtggtggaccattggaacatcacttaattacaaag
tttatacttccatctgcagctgagagaggagattactggcttgcaagcctgcttgagtgg
gaattgggcaattactatcaatcttttctctgcatgcttggtttccagagaagttcttta
actgaaagatctgctctttcatctaatcatgctgcttttatgaacccccatattggtcta
tattgcctcaaattagcaagcaacaattgcatgcgaaatgccacaggggaccaaaatgct
gcaattcttagtaggtgggcaacatttatggcagccactgccttcaacagaagtgggctt
ccttttgaagctttagagtgcctttcatcttccttggtcacttttgagagtgaggatcaa
gaaaggatatcggatgttaaccattctcaaattctacatggaatcttgaagccatctgcc
aatgattcccataattggctatcgaacaatgtggctttgcagctggagtccagtgctaaa
ttagagttggctcttcagtatttctctaaattgatgggggagcatcctagttggcctgat
gctaccttaggatctgttcaacccagtactcgattcaaggagggtgaaatttatcaatac
gacaaattactagaaaattttcaagacaagttatatacaggactgtcaaagtttgagcag
aagttttcagtggcttcttcttgcttgattaaaatgattttggtatggttgtgcaataat
gggctgttgtttattggatatgatctattacttaactatatttctcgagatcgcttgcaa
gatgacagtcatctttttggcgatttagtactgtatcctcttctctgtaaggcgctccta
aaagctattaaagatttttccctttttctttcacggtttattgtcgcctctagcataaca
tgcctccaaccaaagtcatgttatattgagaacgatacatctgttgaagttaaatccaca
tggtcagatactcaggggcattattttcaaggtatcatgccaacattgtggagtttaaga
actgctataaggatcagttctggcttcttatctgaggatatgactacaagattctttgtt
attattgatttatatgaattttctgtacattttgcatctgcttggcttcggcgaaactct
aaaggtctgttgttgatggtgcaaccactcttgattgcatttaccgatgggcataaccct
tgtgaagttgatatggcaaatctcaagaacattcttaaccacattgcagagttgttggct
agcaatatttcagtggatgatgcacgattagggctgaatgttactgaattcatgccattc
aagttagatggagaaacagtgaatttattttcagaagttgaaaaatggcatatcataggg
gcttgtttgtggcagcatatggccagactaatgaaacataagctggatttgttatccatt
aatgttgatcatagttccttctctggagtttcccattgcccagcatctagttcaatgaat
tttgcatatgataacaacatgacagaacaaattgcatcgctctcattgatattggccaag
ttactgaagaatacaattttacatgtttcatcttatcatgtaaaagtatttggatcattg
ctgcagttgaaagtagagaatggattgcacataccgactcttgcatggctacaagaatca
aatctgtatcaagccaaagtcaacaatcaggatgcaagtgctgatataataaacagcaaa
gatgaattatcaactttcaatatattgtgggacacctgtgctgaccctaacataatatcc
aaaggttttgcagaagaaaaaataaactggtcacaatttgtccatcatagatcctctcat
ggctggaacgagttatatgagagcatcagagaagagcataaaaccaaggaagttttggat
catgaagttagattaagcgataatcattccagtggtgaagttagatcaagcaccaagggt
ctacttaagaatgggcgctcatttctaacttcttggcagaaggatgcaactattaccaag
gaggtgccacatttccagaatgctaaagaaatatacaagagagatggagagctgttggag
gcactctgtgttaactccattaatgaagggcaagctgcaattgctagcaatagaaagggc
ataattttctttagctgggatggtgggataccttttgacgatcaatcagaatatacctgg
tccaatgctgattggccaacaaatgggtgggcaggtattgaatcaagaccagttccaaca
tgtgtttctcctggtgctggtcttgtaagaaagaaaggggcacaccttggattgagcagg
gaaacccttggcatgggttctttagcaagaccaaggaaagacttaagaggtggtggagca
tttggtattccaggttatgagggtacgggtgcctctggcttgggttggaaagttcaagag
gattttgaggagtttgttgacccaccagcgacagtggaaaatataagtacaagggctttc
tctagtcacccctcaagacccttcttcttggttggttccagcaacacacacatatactta
tgggagtttggtaaggacaaagccactgcaacttatggtgtgctccctgctgcaaatgtt
cctccaccgtatgctcttgcatcaatatctgctttgcagtttgaccactgtggacacagg
tttgctacagctgcattggatggtactgtatccacatggcagctggaggttggaggaagg
agcaacatccgcccaacagaatcatctctctgctttagtggtcatgcattggatgtcaca
tatgttacttcaagtggatcagttgttgctgcagctggacatagctccaatggcgttaat
gtagttgtctgggacacattggctccacccacgacctcgcgagcttcaattacttgtcat
gaaggtggtgcccgctccatttctgtgtttgataatgacattggaagtggttccatatct
ccccttattgtaactggtggtaaaggtggtgatgttggacttcatgacttccggtacata
gcaacaggaaagactaaaaggaataagcattttgataatggtgatggaagtaacaatatg
ccttctaatgctgaaatgcaagcaggagttggtaacaaagttggtgatcagaatcagaat
gggatgctttggtatatacccaaggctcacttaggaagcgtcaccaagatatgcaccata
cctaataccagcttattcttaactggaagcaaggatggagatgttaaactctgggatgcc
aaagtagccaagctggtttaccaatggcccaaattgcacgaaaggcgcacctttttgcaa
ccaagcacgcgaggttttggcggagttgtcagggctgcagtaacagatattcaagttgtt
tctcatggttttctttcttgtggtggggatggctctgtaaagttggttcagctcaaagat
tacccgcatgagaaattgtag
DBGET
integrated database retrieval system
