Jatropha curcas (Barbados nut): 105642860
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Entry
105642860 CDS
T03922
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105642860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
jcu04040
]
105642860
Ion channels [BR:
jcu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105642860
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DNA_pol3_tau_4
Motif
Other DBs
NCBI-GeneID:
105642860
NCBI-ProteinID:
XP_012083222
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MNIIRGNKFVRFEDWNSDKSCSSERQYSIYDGFYARKVKPTVSAVWGGIHRGWEMGSDRF
KGLRKPTKESVNKRKIFDPQGAFLQKWNKIFVLACFLAVSLDPLFFYIPVIDGVNKCLDL
DKKLETTACVLRTFIDVFYVLRIIFQFRTGFIAPSSRVFGRGELVEDPIVIARRYLTSNF
VIDVMSILPLPQVVVLIIIPSLKGPVSLVAKDLLKYIILSQYVPRLMRIYPLFNEVTRSS
GILTETAGAGAIFNLFLYMLASHVIGACWYLLSVERQDNCWRRVCEAPLCRSNDLYCGDH
RADNTALSTFLKDSCPFIQPDEIKNSTIFNFGLFTDALDSGVVESWDFPKKFFYCFWWGL
RNLSSSGQNLKTSTYVGEILFAVFISIAGLVLFSLLIGNMQKYLQSTTVRVEEMRVKRRD
ADQWMAHRMLPENLRERIRKYEQYKWQETRGVEEQTVIRTLPKDLRRDINRHLCFDLITR
VPMFEKMDEKILDAICDRLRPTLYTKDSCIVREGDPVDEMLFIMRGDLVSVTTNGGRTGF
FNAVYLKAGDFCGEALLTWALDPQSTSNLPISSRTVQALSEVEAFALVAEDLKSVASQFR
RLHHKDIQHTFRFFSVQWKTWAACFIQAAWRRYCRRKQANSLRQAEENLQDILGKEAASL
PSLGATIYASKFAANALRNLRQNGGRTPRLPHRLALVPQKPTEPDFSAHNR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatcaggggaaataaatttgtcaggtttgaagactggaattcagacaagtcc
tgtagttcagaaagacaatattccatatatgatgggttttatgcaagaaaagtaaagcca
acagtaagcgcagtttggggtggtatccacagaggctgggagatgggttctgataggttt
aaagggttgagaaaaccaacaaaagaatcagtcaataaaaggaaaatttttgatccacag
ggtgcatttctccagaagtggaataaaatatttgtgcttgcctgttttctcgcagtttcc
ctagaccctttgttcttttacattccagtgattgatggggttaacaaatgccttgatttg
gataagaaattggagacgactgcttgtgttcttcggacattcattgacgtgttttatgta
cttcgcataatatttcagtttcgtactgggtttattgccccttcttctcgagtatttggt
agaggcgaactggttgaggatccgatcgttatagctagaagatacctgacctccaacttc
gtgatcgatgtcatgtcgattcttccacttcctcaggtagtagtcttaatcatcattccc
agcttgaaaggtcctgtttcattggttgctaaagacttgttgaagtatattattttgtcc
cagtacgtgccaagattgatgagaatctatcctttgttcaatgaagtaactagaagttct
ggcatacttactgaaacagcgggggctggggctatttttaatctctttctctacatgcta
gccagtcatgtaattggagcctgctggtacttgttgtcagtagaacgccaagataactgc
tggcgtagagtgtgcgaagcccctctgtgtcgttctaatgatctttactgcggagatcac
cgtgcagataatacggccttgagcacatttctgaaagattcatgcccttttatccagcct
gatgaaattaaaaattcaactatcttcaacttcggattgttcaccgatgctcttgattcg
ggtgtggtggaatcatgggattttcctaagaaattcttctactgcttttggtggggtctt
cgtaatcttagctcttcgggccagaacctcaagacaagcacttacgttggagagattctc
tttgctgttttcatatccattgcagggttggttttattttcactgcttattggcaatatg
cagaaatatctacaatccaccacggttagagtagaggaaatgagagtgaaaagaagagat
gcagatcagtggatggcacaccgtatgcttcctgaaaacctgagggagaggattaggaag
tatgagcaatacaaatggcaggaaaccagaggtgtggaagagcagactgtaatccgtaca
cttcctaaagatctcagaagggacatcaatcgccatctctgctttgatctaatcacgaga
gtgccaatgtttgaaaaaatggatgagaaaatcctggatgcaatctgtgatcgtctcagg
ccaaccctttatacaaaggatagttgcattgttcgtgaaggtgatccagttgacgagatg
ctatttatcatgagaggtgatctagtgagtgtgaccaccaatggtggaagaactggtttt
ttcaatgctgtttatttaaaggctggtgatttttgtggagaagcgcttcttacatgggca
ttggatcctcaatcaacatccaatctccctatttcgagtagaactgtgcaggctttatca
gaggttgaagcctttgctttagtagctgaagacttgaaatctgttgcctcccaatttcga
cgtcttcaccacaaggatatccagcacacgttcaggttcttttctgtgcaatggaaaaca
tgggcagcatgcttcatacaagcagcttggcggcgttactgtaggaggaagcaagctaat
tctctacgtcaagcagaagaaaatttgcaagatattttgggaaaggaggctgcaagcttg
ccaagccttggcgccaccatatatgcatcaaaatttgccgccaatgccttgagaaatctg
aggcaaaatggtggacgcacccctagattgccacatagattggcgttggtgcctcaaaag
ccaactgagcctgatttttctgctcacaatcgctag
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