Jatropha curcas (Barbados nut): 105642951
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Entry
105642951 CDS
T03922
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jcu04131
]
105642951
Membrane trafficking [BR:
jcu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
105642951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
105642951
NCBI-ProteinID:
XP_012083339
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MYMAYGWPQVIPLEQGLCPSSQQIIYLKVMNRLLLVVSPSHLELWSSSQHKVRLGKYKRD
AKSVESEGENLQAVWSPDAKLIAILTTSFFLHIFKVQFTEKRIQIGGKQPSGLFLANISL
LLSEPVPFAEKNLTVSNIVSDSKHMLLGLPSGSLYSISWKGEFNGAFQLEPCPHESSEVS
ISPHSLVNGLGSGPSGGLASNHNIIRKPAITQLELCLPMRLLIVLYSEGQLVYCSVSKKG
LKQAESIRAEKKLGSGDAVCASVASDQQILAVGTRRGVVELYDLTESGSLIRSVSLYDWG
YSMDDTGSVSCIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQVGLGSVSSPKVKSN
QDCKDEPLMGGTSLMQWDEYGYKLYAIEAGSRERIIAFSFGKCCLSRGVSGMTYVRQVIY
GEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMYLAVAGLHGLILYDMR
LKKWRVFGDITQEQKIQCKGLLWLGKIVVVCNYIDSSDTYELLFYPRYHLDQSSLLCRKP
LFAKPMVMDVYQDHILVTYRPFDVHIFHVKLFGELTPHSTPVLQLSTVRELSIMTAKSHP
AAMRFIPDQIPREGVLKNHLSPSSDLLAREPARCLMLRTNGELSLLDLDDGRERELTDSV
ELFWVTCGQSEEKTNLVEEVSWLDYGHRGMQVWYPSAGVDPFKQEDFLQLDPELEFDREV
YPLGLLPNAGVVVGVSQRISFSACTEFPCFEPSPQAQTILHCLLRHLLQRDKSEEALKLA
QLSAQKPHFSHCLEWLLFTVFDAEISRQNVNKNQVSVLKHAGSCSLLEKTCDLIRNFPEY
LDVVVSVARKTDGRHWADLFLAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQY
CALRLLQATLDESLYELAGELVRFLLRSGKEYGQASADSDRMSPRFLGYFLFRSSYTKTS
LDKSNSFKEQSAHVASVKNILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERYGSA
RLENFASGLELIGQKLEMGTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSEVLYDLF
QHDMRLWKAYSITLQSHPAFAEYQDLLDALEERLSSGSNLEDK
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatatggatggcctcaggtgatccctttagagcaaggactatgtccttct
tcacagcaaattatatacctcaaagtcatgaatcgcctcttgcttgtcgtctctccttct
caccttgagctctggagctcctctcagcataaagtgaggttgggcaagtataagagggat
gcaaagtcggttgagagtgagggtgagaatttgcaggctgtgtggagtcctgatgccaaa
ttgatcgctattcttactacatccttctttcttcacatattcaaggtccaattcactgaa
aaaagaatacaaattggagggaagcaaccgtctggtttgtttctcgctaatatatctctt
cttctcagtgagcccgtaccttttgcagaaaagaacttgacagtgagcaatattgtgagt
gatagcaaacatatgcttcttggacttccaagtggatccttatatagtatttcctggaag
ggagagtttaatggcgcatttcaacttgaaccctgtccacatgagagcagcgaagtctct
atttcaccgcactctttagttaatggccttggttcagggccttcaggaggtcttgcatct
aaccataatatcatcaggaagcctgctattacacagctggagctttgcttaccaatgagg
ttgctaattgttttatactctgagggacaactggtatattgttctgtaagcaagaaaggt
ttaaagcaagctgaatctatcagagctgaaaagaagttaggttctggtgatgctgtgtgt
gcttctgtagcttcagatcaacaaatccttgcggttggtactagaagaggggttgttgag
ttatacgatctcactgaatctgggtcactcattcgttctgtgtctttgtatgattgggga
tactcaatggatgacactggttctgtcagttgtattgcatggacacctgataattctgct
tttgctgttgggtggaagttaagaggacttacagtttggtctgtctctggctgtcggttg
atgtcaacaatccgtcaagttggtttaggttctgtttcttccccaaaagttaaatcaaac
caagattgtaaagatgagccgttgatgggtggcacctccctaatgcagtgggatgaatat
gggtataaactttatgcaattgaagcaggctctagggagagaattattgcattttccttt
gggaaatgctgtcttagcagaggagtgtcaggcatgacttatgtccgtcaggtgatatat
ggtgaagatcgattgctagtcgtgcagtcagaagatactgatgaacttaaaattttacat
ctaaatcttccagtttcttacatttctcaaaattggccagttcaacatgtagcagctagc
aaggatggaatgtacttagcagttgctggtcttcatgggttgatattatatgacatgcga
ttgaaaaagtggcgagtttttggtgacattactcaggaacaaaagattcagtgcaaaggt
ttgttatggctggggaagattgttgttgtctgcaactacattgattcttctgacacctat
gaattgcttttttatccaagatatcatcttgaccagagttctttgctttgtcgtaagcca
ttatttgccaaaccaatggtgatggacgtctatcaggatcacattcttgtcacctatcgc
ccatttgatgtacacatattccatgtgaaattatttggtgaactaacgcctcatagcact
ccagtcctgcagctttctacagtacgagaactctcaatcatgactgcaaagagtcatcct
gctgcaatgcgttttatccctgaccagattccaagagaaggtgtcttaaaaaatcacctt
tccccgtcttcagatttattagcaagagaacctgcaagatgtttaatgctgaggacaaat
ggggagctttcacttttggatttggatgatggacgtgaaagagagcttactgactccgtt
gagttattttgggtaacttgcggtcaatcagaggagaagactaatctagttgaggaagtg
tcttggttggattatggccaccgaggaatgcaggtgtggtatccatctgcaggtgttgat
ccttttaagcaggaggattttttgcagttggacccagagctggaatttgatcgtgaagtg
tatcctttggggcttcttccaaatgctggtgttgttgttggtgtatcccagagaatttca
ttttcagcatgcactgagtttccttgttttgagccatcaccacaagctcaaactatattg
cattgcttactcagacaccttctccagagggacaaaagcgaggaggctttaaaactggca
caattatcagcacaaaagcctcatttttcccattgtttggagtggcttctttttactgta
tttgatgcagaaatttccaggcaaaatgttaacaaaaaccaagtatcagtccttaaacat
gctggcagctgctctcttttggagaagacatgtgatttgatcagaaatttcccagagtat
ctcgatgtagttgtaagtgtagcaagaaaaactgatggccgacactgggcagatttattc
ttagcggctgggcgatccacagagttgtttgaggaatgtttccaacgaagatggtatcga
actgcagcttgctatatacttgttattgctaaacttgaagggcctgctgtcagtcaatat
tgtgctttacgtttgttacaggcaacacttgatgaatctttgtatgaacttgctggggag
ctggtgaggttcttgttgagatctggaaaagaatatgggcaggcatcagcagattctgac
agaatgtctccaagattcttgggttattttctcttccgttctagttacacgaagacatcc
ttggataagagcaactcattcaaagagcaaagtgctcatgttgcttctgtgaaaaacatt
ttagaaagccatgctagctatttgatgtcagggaaagaactttccaagcttgttgcattt
gtgaaaggcactcagtttgatttagtggaatatcttcaacgggaaagatatggttctgct
cgattggaaaactttgcgtcagggctggaactaattgggcagaagcttgaaatgggtaca
ctgcagagtcgcctagatgctgagtttttgttggctcatatgtgttctgtcaagttcaag
gagtggatagttgtcttggccactctcttaagaagatccgaggttctttacgatcttttc
cagcatgacatgcggttgtggaaggcatatagcatcactcttcagtcacaccctgcattt
gctgaataccaagatttacttgatgccttggaggagaggctctcatctggctcaaatttg
gaagacaagtga
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