Jatropha curcas (Barbados nut): 105643096
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Entry
105643096 CDS
T03922
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jcu04131
]
105643096
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
jcu04812
]
105643096
Enzymes [BR:
jcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
105643096
Membrane trafficking [BR:
jcu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
105643096
Cytoskeleton proteins [BR:
jcu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
105643096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
Vps4_C
NPHP3_N
AAA_14
AAA_22
AAA_16
TIP49
Mg_chelatase
AAA_2
MIT
DUF815
RNA_helicase
nSTAND3
AAA_25
Guanylate_kin
IstB_IS21
AAA_24
TniB
nSTAND6
AAA_7
Motif
Other DBs
NCBI-GeneID:
105643096
NCBI-ProteinID:
XP_012083544
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MSFFKGIIDSLGSVLSSYSSSYQFQEENPSSGTMEGIAGNTVTNERAAYKLKGYFDLAKE
EIARAVRAEEWGLVDDAIVHYKNAQRILVEASSTTVPSYISASEQEKVKSYRQKISKWQG
QVSERLQVLNRRAGVLSAGTSSNKNTITHAHTAAVSSSTSNVKQDLSHMSPRSTRNSPVI
RNQTDKAASSKHVQDSGNGYEAKLVEMINTAIVDRSPSVKWDDVAGLEKAKQSLMEMVIL
PTRRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAE
KLVRTLFMVAISRQPSVIFMDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTSSSDDLV
IVIGATNKPQELDDAVLRRLVKRIYVPLPDKNVRRLLLKHKLKGKAFSLPDGDLERLVSE
TEGYSGSDLQALCEEAAMMPIRELGANVLSVQSNQVRRLRYEDFQKAMTVIRPSLSKSKW
KELEQWNEEFGSN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttcaaaggcataatcgactcgctaggatcggttctctcttcatatagttct
tcgtatcaattccaagaagaaaaccctagctctggaaccatggaagggatagctggcaat
acggtaacgaacgaacgtgctgcgtataagctgaaggggtacttcgatttggctaaagaa
gagattgccagggctgtaagggccgaagaatggggtttagttgatgatgcaattgtccac
tacaagaacgcccaaaggatacttgttgaagcaagttcaacaactgtgccttcttatatc
agcgctagcgaacaagagaaggttaaatcttaccgtcaaaaaatatcaaaatggcagggt
caagtttcggagagattacaagtgttaaatcggcgagcaggtgttctttcggctggcaca
tcgtcaaacaagaacaccataactcatgcacatactgctgcagtttcatcatcaacatca
aatgttaaacaagatctgtcacatatgtctcctcgttcaactagaaacagtccagtaatt
aggaatcagactgataaagctgcaagctcaaagcacgtgcaagattctggtaatggttat
gaagcaaaattagttgaaatgataaatactgcaatagtggatagaagtccttctgttaaa
tgggatgatgttgctggacttgagaaggcaaaacaaagtttaatggagatggttattttg
cctactaggagaagagacctgttcactgggcttcggaagccagctcgaggtctacttctc
tttgggccacctggtaatggaaaaacaatgcttgccaaagcagttgcttcagagtcacag
gcaacatttttcaatgtttcagcatcttccctaacatcaaaatgggtgggagaggctgaa
aagcttgtccggactctctttatggttgcaatttcccgacagccatcagtgattttcatg
gatgaaattgatagtattatgtcaacaaggctggccaatgagaatgatgcaagcagaagg
ttgaagtctgagtttctgatacaatttgatggggtgacctctagttctgatgatttagta
attgttattggtgctacaaataagccacaagaattggatgatgcagttcttaggagactg
gtgaagagaatttatgtaccattaccagataaaaatgttaggaggcttcttttgaaacac
aaactcaagggcaaagctttttccttgcctgatggagaccttgaaagacttgtcagcgaa
acagaaggttattctggaagtgatctacaagctttgtgtgaagaagctgcgatgatgcca
attagagagcttggcgcaaacgttctcagtgtccagtcaaatcaggtgagacgactaagg
tatgaagactttcagaaggcaatgaccgtaattagacccagtctaagcaaaagcaaatgg
aaagagcttgaacagtggaatgaggagtttggatccaactaa
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