Jatropha curcas (Barbados nut): 105643115
Help
Entry
105643115 CDS
T03922
Name
(RefSeq) polygalacturonase isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu00040
Pentose and glucuronate interconversions
jcu01100
Metabolic pathways
Module
jcu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105643115
Enzymes [BR:
jcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
105643115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
105643115
NCBI-ProteinID:
XP_037491840
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MALKGIQNPNYPFFTIIFLVSIIIIPCYNCFQQDTLNDYLEEEISGYDNSQPYAYPSYFS
SIDDGWSKHFRNLRTDNLTKLVLMILELNDNVLNLKIFDKVGSTSTSVNKISVDDFGAKA
DGTDDTQAFEKAWKEACSSKGAILLVPKNKYSVKQVRFSGPCKSSITVQIYGTIEAWEDR
SAYQKDDRHWLVFDEVEDLVVEGGGIIDGNGNIWWKNSCKVNKDLPCKDAPTALTFYKCK
NLVVKNLTVQNAQQMHVSFQSSRDIKASNLLVTSPEDSPNTDGIHVTETQNIQITNSVIA
TGDDCISIVSGSKNVQAMDITCGPGHGISIGSLGSGNSKAYVSGVTIDGAKISGTANGVR
IKTYQGGSGIANNIKFQNIEMDRVTSPIIIDQHYCDQEKPCKEQKSAIQVKNVVYKNIKG
TSASNVAIKFDCSKNYPCQGILLEDVILKTEGGDEAAKASCSNVKLTEMGVVSPNCP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaaaggaattcaaaaccctaattatccattcttcaccattattttccttgtt
tcaattattattattccatgttataattgttttcagcaagacactctcaatgattacctt
gaagaagaaatatctggctatgataattctcaaccttatgcttatccttcctattttagc
tccatcgatgacggttggtccaagcacttcaggaatttaagaactgataatttaacaaaa
ttagtgttgatgattttggagctaaatgataatgttctaaatttgaaaatatttgataaa
gttggatccacatcaacttcagttaacaaaattagtgttgatgattttggagctaaagct
gatggaactgacgatactcaggcttttgaaaaggcttggaaggaagcttgttcatctaaa
ggagctattcttcttgtgcctaagaacaaatatagtgtgaagcaagttagattctcaggt
ccttgcaaatccagtataacagtgcagatatatggaactattgaagcgtgggaagatcga
tcagcttaccagaaagatgatagacattggcttgtatttgatgaagttgaggatttggta
gttgaaggtggtggcataattgatgggaatggcaacatttggtggaaaaactcatgcaaa
gtcaataaagatcttccttgcaaggatgcacctacggctttaaccttctataaatgcaag
aacttggtagtaaagaacctgacagtccaaaatgcacaacaaatgcacgtgtcttttcaa
agcagcagagatattaaagcctccaatcttttggtaacttcacctgaggatagtcctaac
actgatggaatccatgtcactgaaacccaaaacatccaaattacaaattcagtcatagcg
acaggtgatgattgtatctctattgtaagtggatcgaaaaatgtgcaagccatggacata
acctgtgggccaggccatggaataagtattggaagcttaggctctggaaattcaaaagct
tatgtttcaggagtaactattgatggtgccaagatttctggcactgcaaatggtgttagg
ataaaaacatatcagggaggttcaggaattgccaacaacatcaagttccaaaacattgaa
atggaccgtgtcaccagtcccattataattgatcaacactattgtgaccaagagaaacca
tgcaaagaacagaaatcagcaattcaggtgaaaaatgtggtgtacaagaacataaagggg
acaagtgcttctaatgtggctataaagtttgattgcagcaagaactatccatgtcaaggg
attttgttggaagatgttattcttaaaacggaaggaggagacgaagcagcaaaagcttca
tgcagtaatgttaaattaactgaaatgggagtagtttctccaaattgtccttga
DBGET
integrated database retrieval system