Jatropha curcas (Barbados nut): 105643482
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Entry
105643482 CDS
T03922
Name
(RefSeq) WD repeat-containing protein 43 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105643482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105643482
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105643482
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Utp12
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_ACSF4
ANAPC4_WD40
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
CFAP251_N
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
PQQ_2
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
105643482
NCBI-ProteinID:
XP_012084002
UniProt:
A0A067K6G9
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MVSSNIRDLLTAFSPSLDYLAISSGDGRIKIWDTVKGQVQTEFADITSNDADLYTKAERG
HLSVDYTCMKWLSLDRKKKRKLASSLLILGTGSGDVLALDVSAGQLKWRVNDCHPGGVSA
ISFSTRDSCIYTAGADGMFCKIDPQTGNMVGKFRASSKAISSLSVSPDGKILATAAAQLT
IFNCSDHKKIQKFSGHPGSVSAMIFTEDGKYVLSSAIGERYIALWRTDGGKKQSASCVLA
MEHPAVFLDSRCLENEGVDDPGLCVLAISETGVCYTWYGKSIEELRNAKPTKVALSNQEY
FSKNHKGALPTIFAAKLQGIAEPMAAHVFIAYGLLVKPLFQKIIVHSGTDVKLNASQDGV
LLPMSQSLIKPKRGKDLQNSVTALDRANVEDALLPIPKVSNFHEKRMRDKALSINSEEVM
ADLIDGRCQPEALEKKDGIIEVDTVTTCIEKQLRLLEILGSKDDGTFSSTLASATFDGID
LEANTPQKKMRAAVLSLEPSYAYKLLEILLAKWQSRSCSGQYVLPWIYCILVNHGHSIVA
QEKPESHMLNSLLKVTKSRGVAIQPLLQLSGRLQLVTAQINQAAANKTHLTLHNVQMNYD
EDEDDDDDIDERLYGEDDDESQLSSDDNN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggtctcatcaaatatcagggacctcttgacagcatttagtccttcattggactacctt
gcaatcagttctggagatggtcgaataaagatctgggacactgtgaagggccaggtgcaa
actgagtttgcagacattacatcaaacgatgcagatttatatactaaagctgaacgaggt
cacctttcagtggattatacatgcatgaagtggttgtccctggacagaaagaaaaaaaga
aagttagctagttcattgttgatactaggaacaggcagtggtgatgttttggcacttgat
gtttctgcgggtcaattgaagtggagagtcaatgattgccatcctgggggtgttagtgct
atttcattttctactcgtgattcatgcatttacactgcgggtgctgatggaatgttttgc
aaaattgatccgcagacaggaaatatggtggggaagtttagagcttcttcaaaggcaata
tcatctttgtctgtttcaccagatggaaagatattagcaacagcagctgcccagttgacg
attttcaattgttccgaccacaaaaaaatacagaaattttccggtcatcctggatctgtc
agtgctatgatctttactgaagatggtaaatatgtcctctcatctgctattggtgaaaga
tacattgcattatggagaacagatggtggaaaaaagcagtcagcaagctgtgtccttgca
atggagcatcctgctgtattccttgatagcaggtgccttgaaaatgagggagttgatgat
ccaggcctgtgtgttttggccatttcagaaactggtgtttgctatacatggtatggaaag
agtattgaggaattacggaatgccaagcccacaaaagttgcactatctaatcaagaatat
ttttccaagaatcacaagggtgcattacctacaatatttgctgcaaaattacagggcatt
gcagaacctatggccgcacacgtttttattgcctatggtttgctggttaaacctttgttc
caaaaaataatagttcattctggcacagatgtaaagttgaatgcttcccaggatggagtt
cttttaccaatgagtcagtctctcatcaaacctaagagagggaaagatttacagaattca
gttactgcattagaccgtgctaatgtggaggatgcactacttcctattccaaaagtctct
aattttcatgagaaaagaatgagggataaagctttaagtatcaactctgaggaggtcatg
gcagatttgattgatggcaggtgtcagcccgaggctctggagaaaaaagatggcattata
gaagtcgacacagtaacaacttgcatagagaagcagttgagattattagaaatacttggg
agcaaagatgatggtacattcagctctacacttgcttctgcaacatttgatggtattgac
cttgaagctaatactccacaaaagaagatgagagctgccgttttatctttggaacctagc
tatgcatacaagttactggaaatcttgttggccaaatggcaatccaggtcatgtagtgga
caatatgttctaccatggatatactgtatattggtcaatcatggccattctatcgtggct
caagaaaagccggagtcacatatgctgaattccttattgaaggtcactaaatctagaggg
gtcgctattcaacctttattacaattatcaggtcgattgcagctagtaaccgcacagatc
aaccaagctgctgcgaataaaactcatctcaccttgcataatgttcaaatgaattatgac
gaagatgaagatgacgatgatgatattgatgaacgtctttatggggaagatgatgatgaa
tcccaattgagcagtgatgataataactag
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