Jatropha curcas (Barbados nut): 105644148
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Entry
105644148 CDS
T03922
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X2
KO
K06672
cohesin loading factor subunit SCC2
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jcu03036
]
105644148
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
105644148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
PDS5
Cnd1
PHD_2
zf-PHD-like
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
105644148
NCBI-ProteinID:
XP_012084811
LinkDB
All DBs
Position
Unknown
AA seq
1837 aa
AA seq
DB search
MSNSNSHTTGSGVWGIGLSNTIHSEVAPCLPLPSLPVFCGASDPNLRLFDEATAWSLNRS
EILSQSVRIADLLRETDVSYLNLRHETRPCPSEFVEPLELYDQVLQCNPQAFEHGTPLQC
NPEAFEHVTPLQCNPEAFEHVTPGKKQTSENTVFESKPIGSSVPVFKQGHREYDGTQDHQ
LNSIHQLNSIPNDIASSSKKPKVKKKVTDDIPPVVQPDPAEFQDAIIGSFCDMLEDFYGR
SEIMSDERDEAEWLSVPVAELRILVNEIMSIRAKRLLHLVPVDILVRLLRVLDHQIHRAE
GLSVDECDHPDSDAISLVFCALESIHAALAVMAHNNMPKQLYKEENIERILEFSKHQIMD
VISAYDPAYRALHKSNDNGAPEFDEDEDLETDYGSASKRRRSQKSVKMKKSTSNKVSGAI
NTILQKLCTVLGLLKDLLLIERLSDSCILQLVKTSFTTFLVDNIQLLQLKAIGLISGIFY
KYTQHRTYILDEIVQLLWKLPVSKRALRSYHLPDEEQRQIQMITALLIQLVHSSANLPDA
LREASSGNSILEISLDASYPPKCHEAVTETCCLFWTRVLQRFTTVKNQDASELKVMMENL
VTDLLTTLNLPEYPASAPILEVLCVLLLQNAGLKSKDTSARSMAIDLLGTIAARLKQDAV
ICSKNTFWVLVELNSGDNINQSYPEDICFVCLDGRLDKTLFMCQGCRRFFHADCMGVREH
EAPNRSWQCQICVSKKQLVVLQSYCKSQSKDEGKKNSIHSEKNSKACDPITKVEIVQQLL
LNHLQDSVSADDVHLFVRWFYLCLWYKDDPKSQQKLFYYLTRLKSNLVVRDSGTTHSMLM
RDSVKKITLALGQNSSFCRGFDKILHMLLASLRENSPVIRAKALRAVSIIVEADPEVLRD
KRVQLAVEGRFCDSAISVREAALELVGRHIASHPDVGLQYFEKVAERIKDTGVSVRKRAI
KIIRDMCTANANFSEYTTACIEIISRVSDDESSIQDLVCKTFYEFWFEESSGLQTQYFGD
GSSVPLEVAKKTEQIVEMLRRMPSHQLLVTVIKRNLALDFFPQSAKAVGINPVSLASVRN
RCELMCKCLLERILQVEEMNSEEVEVRTLPYVMALHAFCVVDATLCAPASDPSQFVVTLQ
PYLKTQVDNRAVAQLLESIIFIIDSVLPLIRKLSPVVVEELEQDLKHMIVRHSFLTVVHA
CIKCLCSLSRVAGKGAAVVEYLIQVFFKRLDAPGNDNKQLVCRSLFCLGLLIRYGNSLLN
TIGNKTIDVSYLGLFKKYLRMEDFGVKVRSLQALGFVLIARPEFMLEKDIGKILEATLSS
GSDVRLKIQALQNMYEYLLDAESQMGTDKAGNNQSHYPVEQGNSVPVAAGAGDTNICGGI
VQLYWDSILGRCLDFNAQVRQTALKIVEVVLRQGLVHPITCVPYLIALETDPQESNSKLS
HHLLMNMNEKYPAFFESRLGDGLQLSFMFMQSICGVSPENLNQKLQSKTAGNSKGKPEGG
SLVQARLGVSRIYKLIRGNRASRNKFMSSIVRKFDNPSWTNSVVPFLMYCTEVLALLPFT
IPDEPLYLIYAINRIIQVRAGALEANMKGLILHLSQRNSQKATHENGVFQQEPAQPVLNH
LAMMDLNRMMQQDPVSQPNSTPLTSFDLNGTVQEEPHFVLKSSASGEPKMDKNSGETLSI
SKDDVEKIQVDCLWAIALQLLLKLKRHLKIVYSLNDARCQAFSPNEPPKPGEALSRQNIP
FDVSETSTSVPSTYQDLLQRYQEFKNALKEDAVDYTTYTANIKRKRPTPRKAKYGQRMNG
DEDDDDDDGEWTGGARRQSGGGGGGRRGNSNRAGRQR
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattcaaattcacatactaccggctccggtgtctggggcatagggctttcgaac
actattcactcggaggttgcgccttgcttgccgttgccgtcgcttccggtgttttgtggc
gcatcggatccaaaccttcggttgttcgatgaagctactgcttggtctttgaatcgaagt
gaaattctctctcagtctgttcgtatcgctgatctgcttcgagaaactgacgtttcgtat
ctgaaccttagacacgagacaaggccatgtccatctgaatttgtggagcctttagagctt
tatgaccaggttctccaatgtaatccccaagcattcgaacatggaactcctctccaatgt
aatcctgaagcatttgagcatgtaactcctctccaatgtaatcctgaagcattcgagcat
gtaactcctggtaagaagcaaacttctgaaaatacagtgtttgaaagcaagcccattggg
tcaagtgtacctgtgttcaagcaaggtcatagagagtatgatggaactcaagatcaccag
ctgaactccattcaccaactcaactccattcctaatgacattgcatcatcttcaaaaaag
ccaaaagtcaagaagaaggttactgatgacataccaccagtggtccagccagatcctgct
gagtttcaagatgccatcattggaagcttctgtgatatgctagaagacttctatggtaga
tctgagattatgagtgatgaacgggatgaagcagagtggttgtcagtgcctgttgcagaa
cttaggattcttgtaaatgaaataatgtccatacgtgcaaaaaggcttctacatttggtt
cctgtagatattctagtgaggctcttacgagttctcgatcatcagatacaccgagctgaa
ggtttgtctgttgatgaatgtgatcatccagattcagatgcaatctccttggtcttttgt
gccctggaatccattcatgcagctctggctgtaatggctcataataacatgccgaagcaa
ctatataaagaagagaacattgaaagaattctggagttttctaaacaccaaataatggat
gtcatctcagcttatgatccagcatatcgtgctttgcataagtcaaatgacaatggagca
cctgaatttgatgaagatgaagatcttgagactgactatggttcagcaagcaagagaagg
cgtagtcaaaagagtgtaaaaatgaagaaatcaacatcaaacaaggtctctggcgctata
aatactatactacagaaactgtgcactgttcttggtttactgaaagatttgttgttaatt
gagaggttatctgatagttgcattctacaactggtgaagacaagcttcacaacatttttg
gtggataatattcaactcttgcaattgaaggcaattggtttaattagcgggatattctat
aaatatacacagcaccgaacatatattttagatgaaatagttcaacttctctggaagtta
ccagtttcaaagcgagcactgagatcctaccacctgcctgatgaagaacagaggcagatt
cagatgattactgctttgttgattcaattggtacacagcagtgcaaatcttcctgatgct
ttgagagaagcatcgagtggcaattccatcttagagatctctttggatgctagttatcca
cccaaatgccacgaagctgtcacggagacgtgctgtcttttctggaccagagttcttcag
cgcttcacaacagtaaaaaatcaggatgcttctgaactaaaagtgatgatggaaaatctt
gttacagatctactgacaactctgaatttacctgaataccctgcttcagctcctattctg
gaggttctttgtgtattgctgctccagaatgctgggctgaaatccaaggacacttctgca
cgttccatggccattgatcttcttggtaccattgcagcaaggttgaagcaagatgctgtc
atttgcagcaagaacacattttgggtattagtagaattgaattctggtgataatatcaat
cagagttatccagaagacatctgttttgtttgcttagatggaagacttgataaaacactg
tttatgtgtcaaggatgtcgcagattttttcatgcagattgcatgggagtaagagaacat
gaagctcctaatcggagttggcaatgccagatttgtgttagcaagaagcaacttgttgtg
ttacaatcatactgcaaatcacagagtaaggatgaagggaaaaagaatagtattcattca
gaaaagaattctaaagcttgtgatcccattacaaaagttgaaattgttcaacagttgcta
ttgaatcacctgcaagattctgtatctgctgatgatgtgcacctttttgttcgatggttt
tatctgtgcttatggtacaaggatgatcctaagtcacaacagaagttgttttactacctt
actagactcaaatcaaatcttgttgtgcgtgattctgggactacccattctatgttgatg
agggattcagtgaagaagattactttggcactagggcaaaatagttctttctgtaggggg
tttgataagattcttcatatgcttctggcaagtttaagggagaactcccctgtaattagg
gccaaggcattacgagcagtcagtattattgtagaagctgacccggaggtgttacgtgac
aaacgtgtacaattggctgttgaaggaagattttgtgactctgcgatatctgtaagagaa
gcagcactggaacttgttggtaggcatattgcatcacatcctgatgtcgggctgcagtat
tttgagaaagttgctgagaggataaaagatacaggagtgagtgttcgtaaacgagctatc
aaaattatccgagatatgtgcactgcaaatgctaacttctctgaatatacaactgcttgt
attgaaatcatttctcgtgttagcgatgatgagtcaagcattcaggatctggtctgcaag
acattttatgagttctggtttgaggaatcatctggtttgcagacacaatattttggagat
ggaagttctgtacctttggaggtggccaagaagactgagcaaatcgttgagatgttgagg
aggatgccaagtcatcagcttcttgtcactgtcattaagcgcaacctagcccttgatttt
ttcccccaatcagctaaagctgttgggatcaatcctgtgtcgcttgcatcagttcgtaac
cgttgtgagttaatgtgcaagtgcttactagagaggattttgcaggtagaggaaatgaac
agcgaggaagtagaggtccgaacgctgccttatgtgatggcattgcatgcattttgtgtc
gtggatgctacactttgtgcaccggcttctgatccttcacagtttgtagtcactctacag
ccatatctcaagactcaggttgacaaccgagcagttgcgcagttgctggaaagtataatc
tttataattgattctgttctccccctaatccgaaagttgtctccggttgttgttgaagag
cttgaacaagatttgaagcacatgattgttcggcattcatttttaacagttgtccatgct
tgcatcaagtgtctttgctctttgagtagagtagcaggaaagggtgctgctgttgttgaa
tatcttattcaggtgttcttcaaacgtctggatgctccgggaaatgataacaagcagctg
gtttgccgctctctattttgtcttggtttgcttattcgctatgggaattctttgctgaac
accattggtaacaaaacgattgatgtaagctaccttgggttgttcaaaaagtatcttcga
atggaagattttggtgtaaaagtcagatctctgcaggcattaggttttgttctaattgct
aggcctgaatttatgctggagaaggacattgggaaaatattagaggcaactttatcttct
ggttctgatgttcgtcttaagatacaagcattgcaaaacatgtatgaatatcttcttgat
gctgaaagccaaatggggacagataaagccggtaataatcaaagtcattatcctgtagag
cagggaaacagtgttcctgttgctgcaggtgctggtgatactaacatctgtgggggtata
gttcagttgtactgggatagtattttggggagatgcctggatttcaacgcacaagttcgc
cagactgcacttaagattgtggaggtagtgctgcgacaaggtcttgttcatcctatcact
tgtgttccgtaccttatagcacttgaaacagatcctcaagagtcgaactcgaagttgtca
catcatttgcttatgaatatgaatgagaagtatcctgcattttttgaaagccggctgggg
gatggtctgcaactatcatttatgttcatgcaatccatttgtggtgtttctcctgaaaat
ctaaaccaaaaactccaatccaaaactgctggaaattcaaagggaaaacctgaaggtggc
tcgcttgtgcaagcaaggcttggagtttcccgaatttacaagcttattcgtggaaaccgt
gcttcaaggaacaaatttatgtcttcaattgtgcgtaaatttgataatccaagctggacc
aattcagttgttccatttttgatgtattgcacagaagtacttgctttgctgccatttact
attcctgacgaacccctttatttgatttatgctataaatcggataatacaagttagggct
ggagcacttgaagcaaatatgaaaggattaattttacatttgtcgcaaagaaattcccag
aaggcaactcatgaaaatggagtatttcagcaagagccagctcagcccgttcttaatcat
ttggccatgatggatttaaataggatgatgcaacaagatccagtttctcagcccaattcg
actcctttgacatcgtttgatttgaatggaacagttcaggaagagcctcatttcgtcttg
aaatctagtgcctcaggagaaccaaagatggataagaactctggagagactctcagcatc
tcaaaagatgatgtggagaaaatccaggttgattgtctctgggcaattgcattacaactt
cttttgaagctgaagaggcatcttaaaattgtgtacagcctgaatgatgcccgctgccag
gctttttctccaaatgaacccccgaaacctggggaagctctttcaaggcagaatattcca
tttgacgtcagtgaaacatctactagtgtgccatctacataccaagatttgctacagaga
tatcaggaatttaagaatgctttaaaggaagatgctgttgattacaccacttacaccgca
aacatcaagaggaaacgccctacccctagaaaggcaaaatatggacaacggatgaatgga
gatgaagatgatgatgatgatgacggagagtggacaggaggagctcggcggcaaagtggt
ggtggcggtggcggcaggagaggtaacagcaatagagcaggtaggcagcgatga
DBGET
integrated database retrieval system
