Jatropha curcas (Barbados nut): 105644308
Help
Entry
105644308 CDS
T03922
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03430
Mismatch repair
jcu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105644308
03460 Fanconi anemia pathway
105644308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105644308
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105644308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
105644308
NCBI-ProteinID:
XP_012085006
UniProt:
A0A067JSP1
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MEIELPPPVPVPKDPPKIHRLDESVVNRIAAGEVIQRPVSAVKELVENSLDAHSTSINVI
VKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSAYEDLQSIKSMGFRGEALASMTYV
AHVTVTTITEGQLHGYRVSYRDGAMENQPKACAAVKGTQIMVENLFYNMIARRKTLQNSA
DDYSKIVDLLSRFAIHHTNVSFSCRKHGAARADVHSVVTSSRLDSIRSVYGVSVARNVMK
IEVSDSNPSSSVFDMNGFISDANYTAKKTTMVLFINDRLVECTGLKRAIEIVYAATLPKA
SKPFVYMSIVLPPEHVDVNVHPTKREVSLLNQEIIVEKIQLAVESKLRSSNEAKTFHEQT
VDTSPSCPLGMSKDLNVDSAPSGSKPQKIPVNKMVRTDVSDPAGRLHAYFEAKPRHRLEN
NSSLTAVRSSIRQRRNPKETADLTSIQELINDVEHNCHSGLLDIVRQCTYIGMADDIFVV
LQHNTHLYLANVVNLSKELMYQQVLRRFAHFNAIQLSDPAPTKELIMLALKEEDWDPESN
ENDDLKEKIAEMNTELLKEKAELLEEYFGIYVGSHGNLSRLPVILDQHMPDMDRIPEFVL
CLGNDVDWEDEKNCFQAIAAALGNFYAMHPPLLPNPSGDSLQFYKRRKCVNNLEGLEVAI
DTGDAPTEDEIELELLSEAETAWAQREWSIQHVLFPALRLFFKPPTSMATNGTFVQVASL
EKLYKIFERC
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagaattgccaccacctgttcctgtcccgaaagatccacctaaaattcatcgt
cttgatgagtcagtggttaatagaatcgcagctggagaagtcattcaacggcccgtatcg
gcggtgaaagagctggtggagaatagtctggatgcccactctacctctattaatgtcatt
gtcaaggacggtggcctcaagctcatacaagtgtccgatgacggtcatggcattcgatat
gaggacttgcctatactatgtgagagacacaccacgtcgaagctgtcagcttatgaggat
ttgcagtcgataaaatctatggggtttaggggagaagcgttggctagcatgacttatgtt
gctcatgttactgtcaccacaattactgaaggtcagttgcatggctacagggtatcttat
agagatggcgccatggagaaccaaccaaaggcgtgtgctgctgtgaaagggactcaaata
atggtggagaacttgttctataacatgattgctcggaggaagacactccaaaattctgct
gatgattattcaaaaattgtagacttgctaagccgatttgccattcatcacaccaatgtt
agcttttcttgcagaaagcatggagccgctagagcagatgtacactcggtcgtcacatca
tcaaggctggattctattagatctgtttatggggtctctgtagctcggaatgtaatgaaa
atagaagtttcagatagcaatccctctagttcagtttttgatatgaacggattcatctca
gatgctaattatactgcaaagaaaacaacaatggtgctttttatcaatgatagactggtg
gaatgcactggtttgaagagagctattgaaattgtttatgctgctaccttacccaaagca
tcaaaaccatttgtatacatgtcaattgtgttgccacctgagcatgttgatgtgaatgtg
catccaacaaagagagaggtaagtcttctgaatcaggaaattattgttgagaagatacaa
ttggctgtggaatcaaagttgaggagctcaaatgaggcaaaaacttttcatgagcagaca
gtggatacttcaccaagctgccctttgggtatgagcaaggatttgaatgttgattccgca
ccctctgggtcaaaaccgcaaaaaattcctgtgaataaaatggtaagaactgatgtatca
gatccagctggaaggttgcatgcctactttgaggccaagcctcggcatcgtcttgaaaat
aattcttccttgactgctgtaaggtcttcaattaggcaaagaaggaacccaaaggaaacc
gctgatctgactagcattcaggagcttattaatgatgttgaacacaattgtcattcaggt
ctgctggacattgtacggcaatgcacatatattggaatggcagatgatatttttgtggtg
ctgcagcataatactcatctgtatcttgcaaatgtggtaaacttgagcaaagagcttatg
taccaacaagttcttcgccgttttgcacattttaatgctatacaactaagtgatccggcc
cccacgaaagagctcattatgttggctttgaaagaggaagactgggatcctgaatccaat
gaaaatgatgacctgaaagaaaagattgcagagatgaataccgagttgctcaaggaaaaa
gctgaactgctggaggagtactttggtatttatgttggttcacatggaaatttgtctagg
cttcctgttatactagaccagcacatgcctgatatggatcggattcctgaatttgtgcta
tgtttgggcaatgatgttgattgggaagatgaaaagaactgctttcaagcaattgcagct
gctcttggaaatttttatgccatgcatccccctctactgcccaatccatcaggtgatagt
ttgcaattttacaaaaggagaaaatgtgtaaataatcttgaaggtctagaagttgctatc
gatacaggtgatgctccaactgaggatgaaattgagcttgaactgctctcagaggcagag
actgcatgggctcaacgtgaatggtcaattcagcatgtgttgtttcctgccttgagactc
tttttcaaaccaccaacttcaatggctacaaatggaacatttgttcaggttgcttcactg
gagaagctttataagattttcgagagatgctaa
DBGET
integrated database retrieval system
