Jatropha curcas (Barbados nut): 105644497
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Entry
105644497 CDS
T03922
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105644497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105644497
04121 Ubiquitin system [BR:
jcu04121
]
105644497
03036 Chromosome and associated proteins [BR:
jcu03036
]
105644497
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105644497
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105644497
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
105644497
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105644497
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
105644497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
BRCT
BRCT_2
zf-HC5HC2H_2
zf-RING_6
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
Prok-RING_4
zf-RING_10
RTT107_BRCT_5
Sina_RING
Motif
Other DBs
NCBI-GeneID:
105644497
NCBI-ProteinID:
XP_012085262
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MVDSTKQCSVRSINPWVLHLQKLGLELKCPLCLNLLKRPFLLPCDHIFCNSCLPETKQFG
SQCPVCKAQYVGKDLRLLPFIENMVTIYRSLDASFCPNLFQSSSSDTRSLEQCPTSTSAD
CNDKCKESFKASQEDNSSSGRSMFLQTGNKLAQVTLNCPVENEVPRIDMEGKCNMARGLK
DKEYEMVGSAGYECDGEKNVNSPPVNSQTRAVGIHERGTMQMAMNQVDTLSAGSPPFSDI
KSSENDSNDQYGDDSPQNYQALRLAKRNTGERTKEDRHGGSDSGTDIGNLRDSKRHKKLN
YGPLNACTNGTRPISSQAENLETCYSHSEHKPLSLVTDEPLAPFDDSSVVKTVCGFCQSS
RISKDTGPMLHYLNGKSVEGDEASMPNCIHVHRLCIEWAPQVYFVDETVKNLKAELARGA
KLKCSGCGLKGAALGCYHKSCRRSYHVTCAMEIAGCRWDYDNFLVLCPSHCSVRFPDEKK
AKSKSKKHKLENHHVPTQITTQQPYFWAESSGVKEWVFCGSALSSEEKCLLVEFGSMIGV
PVTKFWRPNVTHVIAATDTKGACTRTLKVLMAILNGRWVLTIDWVKACMKAMCPVDEEPY
EVSLDNHGCQNGPKTGRLGALDNAPKLFNGMNFYFSGDFVSGYKEDLQNLVINAGGNIVE
KKEELVEQSHDQAAAPSRTLVVYNLDPPQGYKLGEEVTILWQRLNEAEDLAAKIGSQVIG
HTWVLESIASYKLQPFVSMHNIRNGHIS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggtggattcgactaaacagtgttctgtaaggtcaattaatccatgggttctccatctc
cagaaattgggtctcgagcttaaatgccctttatgtctaaacttgttaaagcgaccattt
ttgcttccttgtgatcacattttctgcaattcatgtctacctgaaacgaaacagtttgga
tcacagtgtcctgtttgcaaagctcaatatgttggcaaagatctgaggttgttgcctttc
attgaaaacatggtaacaatctatagaagtttggatgcttctttctgtcccaacctgttc
caatctagctcatctgacactaggagtttggagcaatgcccgacttcaaccagtgcagat
tgcaatgataaatgtaaggagtcatttaaagcttctcaggaggataattcaagcagtggg
aggtccatgtttttgcaaacgggcaataagttagctcaggttacattgaattgtcctgtt
gaaaatgaggttccaaggattgatatggaaggaaaatgtaatatggctagaggccttaaa
gataaggagtatgagatggttggtagtgcaggatatgaatgtgatggtgagaaaaatgtc
aattctccacctgtaaattcccagacaagagctgtgggaatccacgagcgtgggactatg
caaatggccatgaatcaggtggatactttgtcagctggcagccctccatttagtgatatt
aagagttcagaaaatgacagtaatgatcagtatggtgatgatagtccacagaactatcaa
gcactgagattggccaagcgaaatactggtgaaaggacaaaagaagataggcatgggggt
tctgactctggaactgacataggcaatttaagggattcaaagagacataagaagttgaac
tatggcccattaaatgcctgcacaaatggtaccagaccaattagttctcaagctgaaaat
ctggaaacttgttactctcattcagagcataaacctttgtcacttgttactgatgagcct
cttgcaccattcgatgactcatcagtggtgaaaactgtctgtggattttgccagtcctcc
agaatctctaaggatactggtccaatgttgcactatctcaatgggaagtcagtggaggga
gatgaagcatctatgcccaattgcatacacgtgcacaggctatgtattgaatgggctcca
caagtctattttgttgatgaaactgttaagaatctgaaggcagaattggccaggggtgca
aaactaaagtgcagtggatgtgggctgaagggagctgccctaggctgctatcacaaatct
tgccggagaagctatcatgttacatgtgcaatggaaattgctggttgccgatgggattat
gataacttcctcgtgctttgtccatctcattgttcagtcagatttccagatgagaaaaag
gccaagtccaagtccaagaaacacaagttggaaaatcatcatgtgccaactcaaataacc
actcaacaaccttacttttgggctgaatctagtggagtaaaagaatgggttttttgtgga
tctgctctgtcttctgaagagaagtgtcttttggttgagtttggtagcatgattggtgtg
cctgtaaccaaattctggagaccaaatgtcacacatgtcattgcagccacagatactaaa
ggggcatgcactaggacattgaaagttctcatggccattttgaatggaagatgggtcctc
acaatagactgggtgaaggcatgcatgaaagccatgtgtcctgtcgatgaagaaccttat
gaagttagtcttgataaccacggttgtcaaaatggccccaaaactggcaggctcggtgca
ctggataatgcaccgaagctcttcaacggcatgaatttctatttttctggcgactttgtt
tcgggttacaaggaagatctccagaatttggtcattaatgcaggaggcaacattgtggag
aagaaggaagaattagtggaacaaagtcatgaccaagcagcagctccttcaagaacacta
gtggtttataacctcgatccgccacaaggttacaaactgggagaagaagttacaattctc
tggcaaagattaaatgaagcagaagatttagctgctaaaataggttctcaggtgattgga
catacatgggttttggaatcaattgcttcatataaattgcagccttttgttagcatgcac
aacattcgcaatggccatatatcttag
DBGET
integrated database retrieval system
