Jatropha curcas (Barbados nut): 105644568
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Entry
105644568 CDS
T03922
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105644568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jcu03041
]
105644568
Spliceosome [BR:
jcu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105644568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
105644568
NCBI-ProteinID:
XP_020539193
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNDADLVEEDDVDAGNMEEDVDGDMADIEALNYDDLDSVSKLQK
TQRYNDIMQKVEDALEKGSDISNQGMVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEEVLQKTIDACDRALALDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEVFQTTPPALRMRACRLLAAK
STLAARVDSTRGDPSGRTGRALREEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAVTDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAA
KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttccttgcagaccttgacgagttatctgataatgatgct
gatcttgttgaggaagatgatgttgatgctggaaacatggaagaagatgtcgatggggac
atggcagacattgaagcccttaattatgatgatttggacagtgtatcaaaattgcagaaa
actcaaagatacaatgacataatgcagaaagtggaggatgctcttgagaagggttctgat
atctcaaatcaaggaatggtgctcgaagatgatcccgaatatcaactgattgttgaatgc
aatgcattgtctgttgacattgaaaatgaaataataataatccacaatttcattcgtgat
aagtaccggttgaaatttccagagctcgaatcacttgtgcatcatcctattgattatgct
cgtgtggtgaagaagattggtaatgagatggatttgacccttgttgacctggaagggctt
ttgccttcagctattataatggtggtttcagtgacggcatcaacaacaagtggcaaacca
cttcctgaggaagtccttcaaaagacgattgatgcatgtgatcgagcccttgctcttgac
tctgcaaagaaaaaagtccttgatttcgtagaaagtagaatgggatacattgcacccaat
ctttctgctattgttggaagtgctgtagcagctaagcttatgggaacagctggtggtctg
tcagcattagccaagatgcctgcctgtaatgttcagcttcttggtgccaagaagaagaac
cttgcaggattttccacggcaacatctcaatttcgtgtaggttatatcgagcaaacagag
gtatttcaaaccacaccacctgctctgagaatgcgtgcttgccgactcttggctgcaaaa
tcaacacttgcagcaagggtagattctacaaggggggatccatctggaagaactggaaga
gcccttcgagaagaaatacataagaaaatagagaagtggcaagagcctcctcctgcaaag
caacctaaaccacttccagttcccgattctgagcctaagaaaaagagaggtggtcggcgg
ttgagaaaaatgaaggaaagatacgctgtgacagacatgaggaagcttgccaataggatg
caatttggtgtgcctgaagagagctctttaggtgatggattgggggaaggctatggaatg
cttggtcaagctgggagtggcaagctgcgtgtgtctattggtcaaagcaaactcgctgct
aaagttgcgaagaaattcaaggagaagaattatggaagcagtggtgctacatctggtctg
acatcaagtctggcgtttacaccagtgcaggggattgagctcacaaatccacaagctcat
gcccaccaactcggcagcggaacccagagtacctacttttccgagacgggaacattttca
aagatcaagagaacctaa
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