Jatropha curcas (Barbados nut): 105644904 Help Entry 105644904         CDS       T03922                                  Name (RefSeq) endoribonuclease Dicer homolog 2   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism jcu  Jatropha curcas (Barbados nut) Brite KEGG Orthology (KO) [BR:jcu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:jcu03036]     105644904 Chromosome and associated proteins [BR:jcu03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     105644904    microRNA pathway     RISC loading complex      105644904 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ribonuclease_3 Ribonucleas_3_3 Helicase_C Dicer_dimer DEAD ResIII PAZ SNF2-rel_dom dsrm Helicase_C_2 SWI2_SNF2 AAA_22 Motif Other DBs NCBI-GeneID:  105644904 NCBI-ProteinID:  XP_012085800 LinkDB All DBs Position Unknown AA seq 1413 aa AA seqDB search MEPADMDIDATQQVAADRLPFARSYQLEALEKAIQQNTVLFLETGSGKTLVAIMLLRTFA YLIRKPSPYVAVFLVPQVVLVKQQAEAVETHTDLNVGKYWGEMEVDYWDAAIWKQQIHKY EVLVMTPQILLDGLRHSFLKLDLIKVLIFDECHHARGKHPYACILTEFYHRLLNSGTKMG DLPRIFGMTASPIKSKGANSELAYWNNIRELENLMFSKVYTCASESVLAEFIPFSTPKFK FYKHVNIPYPIYASLADILNILKAKSECRLKQSDLIDSVVESTKKRISKTHSTLMYCLDE LGVWFAFKAAHILSCHDNGLLSWSKLDISDESIAKEFSLIASQEFDKCIKTATEHLGPTW SIGDNLKADIDAGLLTTKIFCLSESLLEYRDLKDIRCIVFVERVMTAIVLQSFLSELLPR HNGWKTKYIAGNNSCLQTQTRKTQNEIVEEFREGKVNIIVATSILEEGLDVQSCNLVVRF DPSATVSSFIQSRGRARMQNSDYLLMVKKGDLSTSSRLRNYLASGEIMRKESIRHATVPC SPLRSEMCEDEYYCVESTKAIATLSSSITLIYIYCSRLPSDGYFKPSPRCLIDKEKETCT LILPKSCPIQTIHVQGNIKTLKQKACLEACRQLHQIGALTDNLVPDIVIEEAVAQEVGNI PYDDEQPVYFPPELVSQGSQGLKTKYYCYLIELNQNFDHDIPVHNIVLVMRSELDPDISS LNFDLEVDRGLLTVKLKYIGEIHLTPVMVLTCRHFLTNLFKVLMDHSQNKLEEVLNGLEQ RNASEIDYFLLPAMISCQKPSIDWKSVTSVFFPNKNALKDHVSCPLKNSVRIIQTKNGPV CKCMLQNSLVCTPHTGKVYCIKGIFDDLDGHSILKLRNGDYKTYKEYYRDQYGIQLCFDQ ELLLSGRHIFPLHNYLQRCRQQKGKETQNGYVELPPELCCIIMSPISISTIYSFTFIPSI LHRLESLLIAINLKKIHLDQCLQNFTIPTMKVLEAITTKKCQEIFHLESLETLGDSFLKY AASQQLFKNYQNDHEGLLSIKKDKIISNATLCKLGCGRKLPGFIRNEPFDPKNWMIPGDN SGNYSLNEEFLSNTRKIYVTGRRKLKEKVVADVVEALIGAYLSTGGEIAGLLFLDWIGIK AEFDNIPYVRHFEVKAERLVNVSYLESLLNYQFRDPSLLVEALTHGSYMLPEVPRCYQRL EFLGDSVLDYLITVYLYKQYPGMSPGLLTDMRSASVNNDCYAQSAVRGGLHKYICHASQK LHKDIAIAVENFNNVSSAPTFGWESETSFPKVLGDVIESLAGAIYVDSGYNKEAVFRSIR PLLEPLITPETIRLHPVRELNELCQKNNFEKSKSVVQRKNGMYSVTEEVVAHGEIFKHTS EAADKKTAKRVASKEVLRALKDTIYRISAERAK NT seq 4242 nt NT seq  +upstreamnt  +downstreamnt atggaacctgctgacatggacatagatgcaacccaacaagttgcggctgatcgtctccct tttgctagaagctatcaactggaggcactggagaaagccatacaacagaacacagtactg ttcttggagactggttctggcaagactctggttgcgataatgcttctgcgtacttttgcc tatcttattcgcaagccttcaccttacgttgctgttttcttggttccccaagttgtcctg gtcaaacaacaagctgaagctgtggaaacacatactgacttgaatgtgggtaagtactgg ggggaaatggaagttgactactgggatgctgctatttggaagcaacaaatacacaagtat gaggtgcttgtgatgacaccacagattttgcttgatggcttaaggcatagttttttaaag ctagacttaataaaggttttgatatttgatgaatgtcatcatgcgaggggtaaacaccca tatgcttgtattttgacagagttctatcaccgtctgttgaattctggaacaaaaatgggc gatcttcctaggatatttgggatgacagcttctccaataaagtcgaagggagcaaactcg gaattggcctattggaacaatattcgggagcttgagaatttgatgttttcaaaggtgtac acgtgtgctagtgaatccgtacttgcggagtttataccattttcaactccaaaatttaaa ttttacaagcacgtcaacatcccttatcctatatatgcaagtttagctgacattttgaat attttgaaggcaaagtctgaatgtcgcttgaagcaatcagatcttattgattctgtggtg gaatctacaaagaagagaatatcaaaaacacattctactttgatgtattgtttggatgaa cttggtgtttggtttgcttttaaggctgcacatatcttatcatgccatgacaatggcctt ctttcatggagtaaattagacatctctgatgaaagtattgctaaagagttcagtttgatt gcttcacaagaattcgataaatgtattaaaactgctactgaacatctgggcccaacatgg tctattggtgataatcttaaagctgatatcgatgcagggcttttgactacaaaaattttt tgcctcagcgagtcacttcttgaatatagagatttaaaggacataagatgtatagttttt gtggaaagggtcatgacagcaattgttcttcagtcgtttctgagtgagttgcttccaaga cataatggctggaagactaaatatatagcaggaaataactcatgtttgcaaacacagaca aggaaaacacagaatgaaattgtggaagaatttcgtgaaggcaaggtgaatataattgtt gcaacttcaattcttgaggaaggtttagatgtccaaagttgcaacttggtggttagattc gacccttcagctacagtgagcagtttcatacagtcccggggtcgtgctcggatgcagaat tctgactacttgttaatggtgaagaagggggatctttctacaagttctcgactgcggaac tatcttgctagtggagagataatgcgaaaggagtctatacgtcatgctactgttccttgt tcacctcttaggagtgaaatgtgtgaggatgagtattattgtgtcgaaagcactaaggca atcgcaactcttagttctagcattactttgatatacatatattgctcacgtctcccttct gacgggtattttaaaccttcccctaggtgtcttatagacaaggagaaggagacttgcacc ttgattcttccaaagagttgccccatacaaactattcatgtacagggaaatattaaaact ttaaagcagaaggcatgccttgaagcctgcaggcaactgcaccagattggtgctttaacc gataatctagttcctgatattgttatagaagaggctgttgctcaagaagttgggaatata ccatatgatgatgaacaacctgtgtacttcccacctgagcttgtcagtcaaggttcacag gggttaaaaacaaagtactattgctacttgattgaattaaaccagaattttgatcatgat attcctgtacataatattgtccttgtcatgaggagtgagctggacccagatatctcaagt ctcaattttgacttagaagttgatagagggctactgacggtgaaattaaagtatataggg gagattcatcttactccagtgatggtccttacatgcaggcactttttaactaatcttttc aaagttcttatggatcatagtcaaaataaattggaagaggtcttaaatggactggagcaa aggaatgcttccgagattgattatttcctgctaccagccatgatatcgtgccaaaaacct tctattgactggaagtctgtcacatcagtatttttcccaaataaaaatgctttgaaggac catgtaagctgtcctctgaagaatagtgtacgtattatacaaaccaaaaatggcccggta tgcaaatgcatgcttcagaattctttagtatgcacaccgcataccggaaaagtttattgc atcaaaggtatattcgatgacttggatggacattcaattttgaagctaaggaatggagat tataagacttacaaggagtactacagagatcagtatggtatccaactgtgttttgatcaa gaacttcttcttagtgggcgacatatttttcctttgcacaattatcttcaaagatgcaga caacagaaggggaaagaaacacaaaatggatatgtggagttgccccctgaactttgttgc attattatgtcgcctatatcaatcagtactatttattcatttacgtttattccatcgatc ctgcatcggcttgagtctttgcttattgctattaacttgaagaagatccacttggatcag tgtttgcaaaattttactattccaaccatgaaggttttggaagcaattaccactaaaaag tgccaagagatatttcatttggaatcactcgagactctcggggattcttttctgaaatat gctgctagccagcaattatttaaaaattaccaaaatgatcacgagggtcttctcagtatt aagaaggacaagattattagtaatgctacactatgcaaactaggatgtggccgcaaactt ccgggatttatccgcaatgaaccttttgatcctaaaaattggatgattcctggtgacaat tctggaaactactcattaaatgaggagtttctatctaatacaagaaaaatatatgtgact ggaagaagaaagttaaaagaaaaggttgttgctgatgttgtcgaggcactaattggtgct tatcttagcacaggcggtgaaatagcaggcttattatttctagattggattggtattaag gcagaatttgacaatataccatatgtacggcacttcgaagttaaggcagagaggcttgtt aatgtcagttatttggagtcattattgaactaccaatttagggacccttctctgttagtg gaagcattgactcatggttcttacatgctccccgaagttccaagatgctatcagcggctg gaatttcttggagactcggtgttagactatctaattacagtatatttgtataagcagtat cctgggatgtcaccaggtctgttaactgatatgagatctgcttctgtgaacaacgactgc tatgcacaatctgctgttaggggaggactacataaatacatctgccatgcatctcaaaaa cttcacaaggatattgcaattgcagttgaaaattttaacaatgtttcttcagcaccaact tttggatgggaatctgagacatctttccccaaggtacttggagatgtaatagagtctcta gctggggctatttatgttgattcaggatacaacaaagaagcagtctttcggagcataagg ccacttttggagcctttgattactccagagacaattagattgcatcctgtgcgagagcta aatgaattatgtcagaaaaataattttgaaaagagcaaatctgtcgttcagcgcaagaac gggatgtattctgtcactgaagaggtcgttgctcatggtgaaatatttaagcatacatct gaggctgctgataagaaaacagctaaaagagtagcttccaaagaggtcttgagagccttg aaggataccatctacaggataagtgcagaaagagcaaagtag

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