KEGG   Jatropha curcas (Barbados nut): 105645093
Entry
105645093         CDS       T03922                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03020  RNA polymerase
jcu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105645093
  09124 Replication and repair
   03420 Nucleotide excision repair
    105645093
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jcu03021]
    105645093
   03400 DNA repair and recombination proteins [BR:jcu03400]
    105645093
Transcription machinery [BR:jcu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     105645093
  RNA polymerase III system
   RNA polymerase III
     105645093
  RNA polymerase I system
   RNA polymerase I
     105645093
DNA repair and recombination proteins [BR:jcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105645093
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Ribosomal_S4
Other DBs
NCBI-GeneID: 105645093
NCBI-ProteinID: XP_012085995
UniProt: A0A067K1X8
LinkDB
Position
Unknown
AA seq 238 aa
MEENGVSVENGNGGAETNGSFDMGALGRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGY
AIPSVDINISLQEFRAIHGQDPDIDRLKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIA
AQIVNKDILTGLILILQNQITNQALKAMDLFKFKVEMFQITDLLVNITKHVLKPKHEVLT
EREKQKLLKKYSIEEKQLPRLLKKDAIARYYGLEKGQVVKVTYSGDITESHVTYRCVW
NT seq 717 nt   +upstreamnt  +downstreamnt
atggaagaaaatggagtctcagtggagaatggtaatggaggtgctgagacaaatggaagc
ttcgacatgggggctttagggaggtgcttaagcagctatggagatgaaggcagcgcagag
agttgcagatactatctttcaagaagaactgttcttgaaatgttgaaagacagaggttat
gctattcccagcgtagatattaacatctctcttcaagaatttcgagctattcatggccaa
gacccagatatcgatcgcctcaaaatttctgctattcacaagtccaatcccaataaaagg
atgctggtcattttctgtggacctggcgtggtaaaagtcagttcagtacgggtcattgct
gctcagattgttaacaaagatattttaactggtctgatattaatcttgcaaaaccaaata
acaaaccaagccctgaaagctatggatctttttaaatttaaggttgagatgttccagata
actgacttgcttgttaatatcacaaagcatgtattaaaaccaaagcatgaggttctgact
gaacgggaaaagcaaaagcttctgaagaaatactccattgaagaaaagcagcttcctcga
ctcttaaagaaagatgcaattgcacgatattatggactcgagaagggacaggttgtgaag
gttacgtactctggcgacattaccgagtcacatgttacttaccgctgtgtctggtga

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