Jatropha curcas (Barbados nut): 105645225
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Entry
105645225 CDS
T03922
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105645225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105645225
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105645225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105645225
NCBI-ProteinID:
XP_012086156
UniProt:
A0A067JQ87
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MGLPNVSGDLSSEMEVDAFRRLFPLRYYERHLAESIRPDARPLGSARDTTLALGAVASAD
GSALAKIGSTTMLAAIKMEVMTPSTDSPDEGCIAIDFHMPPICSPLVRPGRPAEAAPVVA
KQLSDTILSSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALFSVVAAFSHLQIP
IVSLNDDGKIVVLSEEDEIGRSEKKPVNQEKRKLTLSSLPFSLTFILHKNYILADPTAEE
ESIMETLVTVVLDSSARLVSFYKPGGPVLAYTSAVQDCVALTRQRVKELQGILDEAISGM
EIDRV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggggttgccaaatgtctctggagatttatcatcagagatggaggttgatgcttttaga
cgccttttccctcttcgttattatgagcgtcatcttgcagagtctattcgtcctgatgca
aggccactcgggagtgctagagacacaacactagctcttggggctgttgcttctgctgat
gggtcagctttggctaagattggttcaactactatgttggctgccataaaaatggaagtg
atgaccccttccacagactcaccagatgagggttgcatagctattgatttccacatgcct
ccaatttgttctccacttgttaggcctggtaggcccgctgaggcagcaccagttgtggca
aagcagttatctgatacaatattaagttctggcatgattaatttaaaggaactatctctg
gttagtggaaaagctgcatggatggcatacctggatatctattgtttggatgctgatggt
gctctttttgatgctgcattgttttcagtagttgccgccttctcccatttgcaaataccc
atagtttcactgaatgatgatggaaagatagtagttttgtctgaggaagatgagatagga
aggtcagaaaagaagccagtcaatcaggagaagaggaagctgacactgagtagcctgcca
ttctcattaacattcatacttcacaagaactacatcttggcagaccccactgcagaggaa
gaatctatcatggaaactcttgtaacagtagttttagattcatctgctagacttgtttcc
ttttacaagccaggtggaccagttcttgcctatacatcagctgtccaggattgtgtagca
ttaacaaggcaaagagtgaaggaacttcaagggattttagatgaggccatttctggtatg
gagattgaccgagtttaa
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