Jatropha curcas (Barbados nut): 105645557
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Entry
105645557 CDS
T03922
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105645557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105645557
03036 Chromosome and associated proteins [BR:
jcu03036
]
105645557
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105645557
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105645557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
105645557
NCBI-ProteinID:
XP_012086568
UniProt:
A0A067JMH5
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MFGSTSAFGQSSSSPFASQSVFGQTSNANSNPFAPRPFGSTTPFGSQTGGSIFGGTSTGM
FGTPQTSSPFSSTPAFGSSSSAAFGGTMSSFGASSTSTFGSSSPSFGGSSLFGQKPSFGG
FSSTTQTSPFGSTNQQSQPAFGSGLFGSTTPFGGTSTQSPFSATSSPAFASSTTSAFGAS
STPAFGTNSTLGFGPGTASSFAPASASAFGTTASPGFGTGSGFGVSSTPVFGSAGGFATS
NTPAFGTSTTSGFSVSNTTFGTSSTPSPFGTSTTPSFGSTPAFGASSAPSFSFGSTIGQS
TSAFGSSPFGTANVSPFSSQSSPFVSQATTPAFGQSSFAGNRGGSRVVPYSATADADSGT
GQQAGKLESISAMAMYKDKSHEELRWEDYQLGDKGGPLTPGQSSGGINFNVSNAPPNPFA
NSNAFNQSSASPFSSSISSNPFATKPFGTGSTPTFSPAPFTASPSSNPFQSASAFASTSS
TGFGGNTASSIFGPSTSPSFGSGSSLFNSSTGQTTSSPFGNFANTQPSLSFPSTTPSFSQ
TGSAFGQVTASFAPSTTPSFTQSSIFNTPSTVFSFSSNPSLITSANQGMFSHTALPQSSP
FQLPQTSQAIGVLNFSNLGQTQAVAPVGVAGSSSMFGQSTFGALSTPQSSVALQPVTVAN
PFGTLPAMPQMSIGRAGTAPSVQYGISSMPVVDRPAPVRISSLLMSRHLSQRRIRLPARK
YNPKPDGAKVPFFSDEEETTGTPKADALFIPRDNPRALVIRPTDQRPLRASAEKTSPLKD
TSTPVYGNGKISEVVDVPSSSGSGGKDRNMVEDGVGKERGHHVKLNLKPNGVHEDSSTQK
DESYMTLSGHRAGEAAIVYEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCRHV
KDFVVGRHGYGCIKFLGETDVRRLDLESLVQFNNREVIVYTDDSKKPPVGQGLNKPAEVT
LLNIKCFDKKTGRQFTEGPKIEKYKEMLKRKAEDQGAEFISYDPVKGEWKFRVNHFSKYS
LGEEVDWIGLSARGC
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctctactagtgcttttgggcagtcatcaagtagcccttttgcatctcaatca
gtctttggtcaaacaagtaatgcaaacagtaatccttttgctcccagaccctttggtagt
acaactccttttggttcgcaaacagggggttctatatttggcgggacttcaactggcatg
tttggtacaccccaaacttcctcacctttctcttctacaccagcttttggttcttcatct
tcagcagcttttggtggcaccatgtcctcatttggagcttcttcaacttctacttttggc
agttcctcaccttcatttggtggatcttctctattcggccaaaagccctcttttggagga
tttagttccactacccaaacgagtccatttgggagtacaaatcagcagtcacagcctgca
tttgggagtggcctattcggttctaccacaccttttggtggcacatcaacacagtctccg
ttcagtgctacgagtagccctgcatttgcttcatcaaccacctctgccttcggtgctagc
agcactcctgcgtttggtacaaacagtactctgggctttggtcctggaactgcttcatct
tttgcccccgcaagtgcctcagcttttggcacaacggctagcccagggtttggtactgga
agtggatttggtgtctctagtaccccagtatttggatctgcgggtggctttgcaacttca
aacacacctgcttttggtacttcgaccacatctgggtttagtgtttccaatacaaccttt
gggacttctagtactccttctccctttggaacgtcaactactccttcttttgggagtacc
cctgcctttggggcttcaagtgccccatcctttagctttgggtctactattggccaatct
acttctgcctttgggagcagtccatttggaactgctaatgtttctccttttagttcccaa
agttctccatttgtaagccaggctacaacaccggcatttgggcagtcatcttttgcggga
aatcgtgggggaagtagagtagtgccttactccgcaacagctgatgctgacagtggtact
ggacagcaggctggaaagctagaatctatatcagccatggctatgtacaaagataaaagc
catgaggaactaagatgggaagattatcaattgggagataaaggtgggccacttactcct
ggtcaatcttctggtgggattaactttaatgtgtccaatgcaccaccaaatccttttgct
aactccaatgcatttaaccagtcatctgctagtcccttttcttcgtctatttcctccaat
ccatttgctacaaaaccttttggaactggaagcacgcctacattcagtcctgcacctttt
actgcttcaccttcatctaatcctttccagtcggcctcggcttttgcatcaacatcatct
actggatttggaggcaacacagcttcatccatttttggcccctctacttcaccctcgttt
ggttcaggatcatccttgttcaactctagcacagggcaaacaacttcttcaccatttgga
aattttgctaacactcagccatcgctttcattcccgtccaccacaccatctttttcgcag
acaggttctgcatttggacaggttactgcttcatttgcgccaagtaccaccccctctttt
acacagtcaagcatattcaatactccctccactgttttttcattctcaagcaatccgtct
ttgataacgtcagctaaccaagggatgtttagtcacacagctttgcctcagtcttcacct
tttcaactgcctcaaacatctcaggccataggtgttcttaatttcagcaatttagggcag
acacaagcagttgctccagtgggtgttgccggttcatcaagcatgtttggtcagagcact
tttggagcattatctaccccgcagagttctgttgctttacagcctgtgactgttgcaaat
ccgtttgggacactccctgcaatgcctcaaatgtctattggtcgagctgggactgcacct
tctgtgcaatatgggatttccagcatgcctgttgttgacaggcctgctcctgttagaata
tcatccttgttgatgtctaggcacctgtcacaaaggcggattaggttacctgctaggaaa
tataatcctaagcctgatggtgcaaaggttccctttttcagtgatgaagaagaaacaact
ggcacaccaaaggcagatgctctcttcattcctcgggataacccaagagctctggtcatt
cgtcctacggaccagaggccattgagggctagtgcagaaaaaacttctccattgaaggat
acatctactccagtatacgggaatggcaaaatttcagaagttgtggatgttccttcctcg
agtggttctggtggtaaagataggaatatggttgaagatggagttggtaaggagcgaggt
catcatgttaagctcaatctgaaacctaatggagttcacgaggatagttcgactcagaaa
gatgagtcatatatgacgcttagtggtcaccgagcaggtgaagctgcaattgtatatgag
catggggctgatattgaggcactaatgccaaaactccggcgatctgactactatacagag
ccacggatccaagaattggcagctaaggaaagggctgaacctgggttctgccgccatgtt
aaggactttgtggttgggcggcatggttatggctgcattaagttcctgggtgagacagat
gtaaggcggcttgatctcgaatctctagttcagtttaataatcgggaggtgattgtttac
acagatgacagcaagaaaccacctgttggacaaggtctaaataagcctgctgaggtaaca
cttctaaacataaaatgctttgacaaaaagaccgggcgtcagtttacagaagggccaaaa
attgagaaatacaaagagatgctcaagaggaaggctgaggaccaaggtgctgaatttata
tcgtatgaccctgtaaaaggagagtggaagttcagggtcaaccatttcagcaagtacagt
cttggggaggaagttgactggattgggctttctgccagaggttgttga
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