KEGG   Jatropha curcas (Barbados nut): 105645695
Entry
105645695         CDS       T03922                                 
Name
(RefSeq) protein SEH1
  KO
K14299  nucleoporin SEH1
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105645695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jcu03019]
    105645695
   04131 Membrane trafficking [BR:jcu04131]
    105645695
Messenger RNA biogenesis [BR:jcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     105645695
Membrane trafficking [BR:jcu04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    105645695
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_RIG_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_Aladin WDR55
Other DBs
NCBI-GeneID: 105645695
NCBI-ProteinID: XP_012086752
LinkDB
Position
Unknown
AA seq 323 aa
MEKSVATLDNGTTCSAWNYCGQRLATGSVDGSLSIFDSRDPGSSSFTCTSKIRVHEAGIV
KVVWVPPEHGDAVACICGDGSLFLWEEVVEDSVLQWKHCKSFQSKANKVLDVQFGALCTS
LKMVLAYSDGHVKVYELLDPLELKNWQLQAEFQNVIDSVSTFGRAMCFSASISWNPKRGE
NQESSFVLGFNSDTPQLNSSKVWEFDEAHQRWLPVAELALPADKSDQVFAVAWATNIGRP
YEVIAVATHKGIAIWHLGLNPDLDGRLPVEKVALLSGFEGEVWQMEWDMSGMTLATTGTD
GFVRLWQSNLNGVWHEQAAFDSS
NT seq 972 nt   +upstreamnt  +downstreamnt
atggaaaaatcagtggctacgctagataatggcacgacatgctcagcctggaactactgt
gggcagaggttggccactggctccgttgatgggagcctctctatctttgattctcgtgat
cccggttcttcctccttcacgtgcacctccaaaattagggttcatgaggctggcattgtg
aaggttgtttgggttccacctgaacatggtgatgcagtggcctgcatttgtggtgatgga
agtttgtttttgtgggaagaggtcgtagaagattcagttcttcaatggaagcattgcaaa
agctttcaaagcaaagcaaataaagtgttagatgtccaatttggtgctttatgtacaagt
ttgaaaatggttttggcatactccgatggtcatgtgaaagtctatgagctcttggatccc
ttggagttaaagaattggcagcttcaggctgaatttcagaatgttattgattcagtatct
acatttggaagggcgatgtgcttttctgcctctatttcttggaatccaaaaaggggtgag
aaccaggaatcaagctttgttctgggtttcaattcagatacaccacaattgaactcctct
aaggtgtgggagtttgatgaggcccatcaacgatggcttccggttgctgagttggctttg
cctgcagataaaagtgatcaggtttttgctgttgcatgggcgaccaacattggccgacca
tatgaagtaatagctgttgctactcacaagggaattgcaatatggcatcttggattgaat
cctgacctggatggaagacttccagtggaaaaagttgcactactctctggttttgaaggc
gaggtgtggcagatggaatgggacatgagtggaatgaccttagcaaccacaggaacggat
gggtttgttagactctggcaatccaacttgaatggcgtttggcatgagcaagctgcattt
gattcgagttag

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