Jatropha curcas (Barbados nut): 105645695
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Entry
105645695 CDS
T03922
Name
(RefSeq) protein SEH1
KO
K14299
nucleoporin SEH1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105645695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105645695
04131 Membrane trafficking [BR:
jcu04131
]
105645695
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105645695
Membrane trafficking [BR:
jcu04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
105645695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_RIG_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WDR55
Motif
Other DBs
NCBI-GeneID:
105645695
NCBI-ProteinID:
XP_012086752
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MEKSVATLDNGTTCSAWNYCGQRLATGSVDGSLSIFDSRDPGSSSFTCTSKIRVHEAGIV
KVVWVPPEHGDAVACICGDGSLFLWEEVVEDSVLQWKHCKSFQSKANKVLDVQFGALCTS
LKMVLAYSDGHVKVYELLDPLELKNWQLQAEFQNVIDSVSTFGRAMCFSASISWNPKRGE
NQESSFVLGFNSDTPQLNSSKVWEFDEAHQRWLPVAELALPADKSDQVFAVAWATNIGRP
YEVIAVATHKGIAIWHLGLNPDLDGRLPVEKVALLSGFEGEVWQMEWDMSGMTLATTGTD
GFVRLWQSNLNGVWHEQAAFDSS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatcagtggctacgctagataatggcacgacatgctcagcctggaactactgt
gggcagaggttggccactggctccgttgatgggagcctctctatctttgattctcgtgat
cccggttcttcctccttcacgtgcacctccaaaattagggttcatgaggctggcattgtg
aaggttgtttgggttccacctgaacatggtgatgcagtggcctgcatttgtggtgatgga
agtttgtttttgtgggaagaggtcgtagaagattcagttcttcaatggaagcattgcaaa
agctttcaaagcaaagcaaataaagtgttagatgtccaatttggtgctttatgtacaagt
ttgaaaatggttttggcatactccgatggtcatgtgaaagtctatgagctcttggatccc
ttggagttaaagaattggcagcttcaggctgaatttcagaatgttattgattcagtatct
acatttggaagggcgatgtgcttttctgcctctatttcttggaatccaaaaaggggtgag
aaccaggaatcaagctttgttctgggtttcaattcagatacaccacaattgaactcctct
aaggtgtgggagtttgatgaggcccatcaacgatggcttccggttgctgagttggctttg
cctgcagataaaagtgatcaggtttttgctgttgcatgggcgaccaacattggccgacca
tatgaagtaatagctgttgctactcacaagggaattgcaatatggcatcttggattgaat
cctgacctggatggaagacttccagtggaaaaagttgcactactctctggttttgaaggc
gaggtgtggcagatggaatgggacatgagtggaatgaccttagcaaccacaggaacggat
gggtttgttagactctggcaatccaacttgaatggcgtttggcatgagcaagctgcattt
gattcgagttag
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