Jatropha curcas (Barbados nut): 105645707
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Entry
105645707 CDS
T03922
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105645707
Enzymes [BR:
jcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105645707
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
Pre-60S particles
Helicases
105645707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
105645707
NCBI-ProteinID:
XP_020540476
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MKPTKWRRVSETMDSTDMQNPNRALTDTRFSDLKPPLSEPVLDALTEAGFEYCTPVQAAT
IPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSPPKPHEVMGIILSPTRELSSQIY
NVAQPFIATLSNVKSMLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERVDILDFRN
LEVLILDEADRLLDMGFQKQISSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVE
VRAETKSLNDSTSSQLSSSKTPSGLQLEYLECEADKKPSQLIDLLLKNKFKKIIVYFMTC
ACVDYWGVVLPRLTALKGFALIPLHGKMKQTVREKALASFISLKNGILLCTDVAARGLDI
PGVDCIVQYDPPQDPNVFIHRVGRTARLGRQGSAIVFLLPKEEAYVEFLRIRRVPLQERK
NTDDVPDVVPQIRAAAKKDRDVMEKGLRAFVSFIRAYKEHHCSYIFRWKELEVGKLGMGY
GLLQLPSMPEVKHHSLSTVGFTPVEDVKLEDIKFKDKSREKQRKKNMQVKKEAQEQEPKP
QKPNKTPNAAPTAMRKKTAKQRRAAQTVEDEEELAREYRLLKKLRKGTIDESEFARLTGT
EEL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaacgaagtggcggcgggtatctgaaacaatggactccaccgatatgcagaat
ccgaacagagcgttaacagacacgcgcttctccgatctaaaaccgcctctgtcggagccg
gttctcgatgctctaacagaagccggtttcgagtattgcacgcctgtccaagcagctacg
attcccctactatgtagctacaaggatgttgctgttgacgccgccaccggctccggaaaa
acccttgctttcgtagtcccactcgttgagattctccggcgagcctcctctcctcctaaa
ccccatgaggttatgggaataattctctctcctaccagggagctttcatcacaaatatac
aatgttgcacaacctttcattgcaaccttatcgaatgttaagtctatgctacttgttgga
ggtgtggaggtgaaagctgatgtgaagaaaatagaagaggaaggagctaatttattgatt
ggcacacctggaaggctttatgatatcatggaacgcgtggatatcctggactttcgaaac
cttgaggttttaattctggatgaggctgataggctattagatatgggatttcaaaagcag
atatcttccatcatatctcgcttacccaagcttcgtaggactggtcttttctcagctaca
caaactgaagcagttgaagagttatctaaagctggactgaggaatcctgtgagggttgaa
gttcgagcagagacaaaatcactgaatgattcaacatcttcacaattatcatcttcgaaa
acaccttcaggtcttcaacttgagtatttggaatgtgaagcagataagaagccatcacaa
cttattgatcttctccttaagaacaaatttaaaaagattatagtttactttatgacttgt
gcttgtgttgactattggggggttgttcttccacgtcttactgctttaaagggttttgct
ttgattcctcttcatggaaagatgaaacagactgtaagagagaaagcgttggcttcattt
atatctctcaaaaatggcattcttctgtgtacggatgttgcagcacgtggacttgatatt
cctggagttgactgtatagtgcagtatgatccccctcaagatccaaatgtttttatccac
agagttgggaggactgctcggttgggtaggcagggaagtgctatcgttttcctgttgcca
aaggaggaagcttatgtagaatttctgcgcataagaagggttcctcttcaagagaggaaa
aatacagatgatgttcctgatgttgttcctcagatacgtgctgctgccaagaaggaccgt
gatgtcatggagaaaggactgagagcatttgtttcatttattcgtgcatataaagagcat
cattgctcatacatcttcagatggaaggaacttgaagttgggaagttgggtatgggttat
ggtttattgcagctcccttcaatgcctgaggtaaaacaccattcactttccactgttggt
tttactccagtggaagacgtcaaattggaggacatcaagttcaaggataaatctcgtgag
aaacaaagaaagaagaatatgcaagtgaagaaagaagcacaagagcaagaaccaaaaccc
cagaagcccaataagacccccaatgctgcccctacagcaatgaggaaaaaaacagctaag
cagagacgggctgcccagacagttgaagatgaagaggagttggctcgagaatatcgtttg
ctgaaaaagttaaggaaggggactattgacgaaagtgaatttgcaaggttaactggaact
gaagaattataa
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