KEGG   Jatropha curcas (Barbados nut): 105645859
Entry
105645859         CDS       T03922                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03030  DNA replication
jcu03410  Base excision repair
jcu03420  Nucleotide excision repair
jcu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105645859
   03410 Base excision repair
    105645859
   03420 Nucleotide excision repair
    105645859
   03430 Mismatch repair
    105645859
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jcu03032]
    105645859
   03036 Chromosome and associated proteins [BR:jcu03036]
    105645859
   03400 DNA repair and recombination proteins [BR:jcu03400]
    105645859
DNA replication proteins [BR:jcu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105645859
  DNA Replication Termination Factors
   ELG1-RFC complex
    105645859
Chromosome and associated proteins [BR:jcu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105645859
DNA repair and recombination proteins [BR:jcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105645859
  Check point factors
   HRAD17(Rad24)-RFC complex
    105645859
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 Rad17 AAA_22 AAA_16 Mg_chelatase Viral_helicase1 RuvB_N RCF1-5-like_lid nSTAND3 AAA_11 AAA_19 AAA_28 AAA_assoc_2 AAA_5 AAA_30 AAA_24 AAA_25 DNAX_ATPase_lid MeaB bpMoxR AAA_18 ABC_tran AAA_3 IstB_IS21 AAA_7 KTI12 NTPase_1 RNA_helicase T2SSE AAA_29 NPHP3_N DNA_pol3_gamma3 DO-GTPase1
Other DBs
NCBI-GeneID: 105645859
NCBI-ProteinID: XP_012086977
UniProt: A0A067JNM6
LinkDB
Position
Unknown
AA seq 335 aa
MASSSSSAGSSTSGYDIPWVEKYRPNKIADIVGNEDTVSRLQVIARDGNMPNLILSGPPG
TGKTTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKLVI
LDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEIL
GRLMVVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQENVFKVCDQPH
PLHVKNMVRQVIEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKE
TGFAHMRICDGVGSYLQLCGLLAKLALVRETAKAS
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggcatcgtcgtcttcctccgccggtagcagcactagcggctacgacattccatgggtg
gagaagtacagacccaacaaaatcgccgacatcgttggcaacgaggatactgtctcccgc
cttcaagtcatcgctcgcgacggcaacatgcctaacctcatcctatcaggtcctcctgga
actggtaaaactacaagtatactggctcttgcacatgagcttttgggaccaaattatagg
gaggctgttctggagctgaatgcttcagatgacaggggtatagatgttgtgaggaacaaa
atcaagatgtttgcacaaaagaaagtgacactccctcctggacgacacaaacttgtaatt
ctcgatgaagctgatagcatgacatctggagcgcaacaagccctgaggcgcactatggaa
atatattcaaattccactcgttttgcccttgcatgcaacacttcttctaaaatcattgag
cctattcagagtagatgtgcgctggttcggttttcaagattatccgatcaagagatactt
ggtcgtctcatggtagtagttgaagcagaaaaggttccatatgttcctgaaggccttgaa
gctattatattcactgctgatggagatatgaggcaagctttgaataacttgcaagctact
cacagtggattccggtttgtcaaccaggaaaatgttttcaaggtctgtgatcagcctcac
ccattgcatgtgaagaatatggttcgccaggtgattgagggaaaatttgatgatgcttgt
tctggtctaaaacagctgtatgatttgggctattctcccactgatataattacaaccctt
tttcgtatcataaagaattatgacatggctgaatatttgaaattggagttcatgaaggaa
actgggtttgcccatatgagaatctgtgatggtgtaggttcctatcttcagctgtgtggc
cttttggctaagcttgccctagttcgcgaaacagccaaagcatcataa

DBGET integrated database retrieval system