Jatropha curcas (Barbados nut): 105645859
Help
Entry
105645859 CDS
T03922
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03030
DNA replication
jcu03410
Base excision repair
jcu03420
Nucleotide excision repair
jcu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105645859
03410 Base excision repair
105645859
03420 Nucleotide excision repair
105645859
03430 Mismatch repair
105645859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jcu03032
]
105645859
03036 Chromosome and associated proteins [BR:
jcu03036
]
105645859
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105645859
DNA replication proteins [BR:
jcu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105645859
DNA Replication Termination Factors
ELG1-RFC complex
105645859
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105645859
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105645859
Check point factors
HRAD17(Rad24)-RFC complex
105645859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
Rad17
AAA_22
AAA_16
Mg_chelatase
Viral_helicase1
RuvB_N
RCF1-5-like_lid
nSTAND3
AAA_11
AAA_19
AAA_28
AAA_assoc_2
AAA_5
AAA_30
AAA_24
AAA_25
DNAX_ATPase_lid
MeaB
bpMoxR
AAA_18
ABC_tran
AAA_3
IstB_IS21
AAA_7
KTI12
NTPase_1
RNA_helicase
T2SSE
AAA_29
NPHP3_N
DNA_pol3_gamma3
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
105645859
NCBI-ProteinID:
XP_012086977
UniProt:
A0A067JNM6
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MASSSSSAGSSTSGYDIPWVEKYRPNKIADIVGNEDTVSRLQVIARDGNMPNLILSGPPG
TGKTTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKLVI
LDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEIL
GRLMVVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQENVFKVCDQPH
PLHVKNMVRQVIEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKE
TGFAHMRICDGVGSYLQLCGLLAKLALVRETAKAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtcgtcttcctccgccggtagcagcactagcggctacgacattccatgggtg
gagaagtacagacccaacaaaatcgccgacatcgttggcaacgaggatactgtctcccgc
cttcaagtcatcgctcgcgacggcaacatgcctaacctcatcctatcaggtcctcctgga
actggtaaaactacaagtatactggctcttgcacatgagcttttgggaccaaattatagg
gaggctgttctggagctgaatgcttcagatgacaggggtatagatgttgtgaggaacaaa
atcaagatgtttgcacaaaagaaagtgacactccctcctggacgacacaaacttgtaatt
ctcgatgaagctgatagcatgacatctggagcgcaacaagccctgaggcgcactatggaa
atatattcaaattccactcgttttgcccttgcatgcaacacttcttctaaaatcattgag
cctattcagagtagatgtgcgctggttcggttttcaagattatccgatcaagagatactt
ggtcgtctcatggtagtagttgaagcagaaaaggttccatatgttcctgaaggccttgaa
gctattatattcactgctgatggagatatgaggcaagctttgaataacttgcaagctact
cacagtggattccggtttgtcaaccaggaaaatgttttcaaggtctgtgatcagcctcac
ccattgcatgtgaagaatatggttcgccaggtgattgagggaaaatttgatgatgcttgt
tctggtctaaaacagctgtatgatttgggctattctcccactgatataattacaaccctt
tttcgtatcataaagaattatgacatggctgaatatttgaaattggagttcatgaaggaa
actgggtttgcccatatgagaatctgtgatggtgtaggttcctatcttcagctgtgtggc
cttttggctaagcttgccctagttcgcgaaacagccaaagcatcataa
DBGET
integrated database retrieval system