Jatropha curcas (Barbados nut): 105646216 Help Entry 105646216         CDS       T03922                                  Name (RefSeq) protein PAT1 homolog isoform X1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism jcu  Jatropha curcas (Barbados nut) Pathway jcu03018   RNA degradation Brite KEGG Orthology (KO) [BR:jcu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     105646216  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:jcu03019]     105646216 Messenger RNA biogenesis [BR:jcu03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      105646216   mRNA degradation factors    5'-3' decay     Decapping complex      105646216 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  105646216 NCBI-ProteinID:  XP_012087418 UniProt:  A0A067JMJ1 LinkDB All DBs Position Unknown AA seq 805 aa AA seqDB search MEGIESGIGIQEISKVDDPKQTGDNSTEDAVFDASQYAFFGKDLVEEVELGGLDDEEEAL PAAELDEEEFLFGRQEGEIVRSLSDIDDLASTFSKLNKVVSGPRGAGVIGDRGSRESSSA AEWAQGDDFPNWFDQQQLLDPEGFQDGKRWSSQPYSSSARLSELKPLYRTSSYPEQQQHH QHFSSEPILVPKSSYTSYPPGQSPQASPNHSHLNIPYLGGGPQMAISLPNLSPFSGPQLQ LTGLHHGSPHFGGNLSQFSSGPSANSRPPNQWMNHTGLYPGDHPNRLNNMLQQLPHQNGL MAPQLMSQLQSQQHRMHHPVQPPLGHLSGMQSQLFNLHPSSSPHLMNKFEAVLGMGDNRD QRPKTAQKGRQNLYYSQHGFDSNGQKIESFWPQFRSKYMTADEIESILRMQLAATHSNDP YVDDYYHQACLSKKSAGAKLKHHFCPTHLRDLPPRARANNEPHAFLQVDALGRAPFSSIR RPRPLLEVDPPNSSISGATDQKVSEKPLEQEPMLAARVTIEDGLCLLLDVDDIDRFLEFN FNQLQDGGVQLKRRRQVLLEGLAASMQLVDPLGKNGHSVGLAPKDDLVFLRLVSLPKGRK LLAKYLQFLSPGGELMRIVCMAIFRHLRFLFGGLPSDVGAAETTNNLAKVVSLCVRRMDL SSLSACLAAVVCSSEPPPLRPLGNSAGNGASLILMSVLERATELLIELQDANNYNMTNRA LWKASFDEFFGLLIKYCINKYDSIMQSSLSDPAEAIKRELPMELLRASVPHVNDYQKKLL YDLSQRSLASQDGNGGHMNSESVLS NT seq 2418 nt NT seq  +upstreamnt  +downstreamnt atggaagggattgaaagtggtataggtattcaagaaatttccaaagttgatgatcctaag cagactggagataactctacagaagatgccgtgtttgatgcatctcaatatgcattcttt ggtaaagatcttgtcgaggaagttgagttaggggggttggacgatgaagaagaggccttg cctgcggctgagcttgatgaggaagagttcctctttggtagacaagagggtgagattgta agatctctttctgatattgatgatcttgctagtacattttcaaagttgaataaagttgtc agtggaccaagaggtgcaggagtaataggtgacaggggatccagagaaagttcatctgct gcggaatgggctcaaggggacgattttcctaactggtttgatcaacagcagctactcgat cctgaaggttttcaagatggcaaaagatggtcctcacagccatattcttcttctgctcgt ttgtcagaattaaagcctttgtacaggacatcttcatatcctgagcagcagcaacatcat caacatttttccagcgaaccaattcttgtgccgaagtcttcttacacttcatatcctcct ggacaatcaccacaggcttcaccaaatcatagtcatctaaacattccatatcttggtggt ggtccccaaatggcaatttctttaccgaacctctctcctttttctggtcctcagctacaa ctgacgggcttacatcatggatcgcctcattttggcggaaatttgtcacaattttcatct ggtccatctgcaaatagccgaccacctaaccaatggatgaaccacacaggtttatatcct ggagatcatccaaaccgtttgaacaatatgttacagcaactaccgcatcaaaatggttta atggctccacagttgatgtcacaactgcagtcacagcagcatagaatgcaccaccctgtt cagccgccactgggccatttatcaggcatgcagtctcagctgtttaatcttcatccttcc tcatccccacatttgatgaacaaatttgaagcagttcttggtatgggtgataatagagat caaagaccaaaaactgctcagaaaggtagacaaaatttgtattattctcaacatggcttt gactccaacggccagaagattgaaagtttttggccgcagttcagatcgaagtacatgaca gctgatgaaattgaaagtattctcagaatgcagctcgctgcaacacacagtaatgaccca tatgtggatgattattatcatcaggcttgtctttccaaaaaatcagctggggcaaagctc aagcatcatttctgtccaactcacttgagggatcttcctcctcgtgcacgtgctaataat gagcctcatgcttttctccaggttgatgcacttgggagggcccctttttcttcaattcgt agaccccgcccacttcttgaggtcgaccccccaaactcatctattagtggtgccactgat cagaaagtttctgagaaacccctagaacaggagccaatgcttgcagctagagtgacaatc gaagatggcctttgccttcttcttgatgtggatgatattgaccgttttcttgaatttaat tttaatcagcttcaagatggtggagtccaattgaaacgcaggaggcaggtcttattggaa gggttggcagcatccatgcaattggttgacccacttggcaagaatggacattcagtagga cttgctccaaaagatgaccttgtgtttttacgattagtatctcttcccaagggccggaag ctgcttgcgaagtaccttcagtttctttccccaggtggtgaactcatgcgaattgtctgc atggctatttttcgtcatttgaggtttttgtttggagggctcccttctgatgtcggagca gcggagactacaaataaccttgcaaaagttgtatcattatgtgtgcgccgcatggatctt agttcgcttagtgcttgtcttgcagcagttgtttgttcctcggagccgcccccacttcga cccctgggaaactctgcaggaaatggggcgtctctcattttgatgtctgttctggaaagg gcaactgaattattgattgagcttcaagatgctaacaactataatatgacgaatcgggca ctatggaaggcctcatttgatgagttttttggcctacttataaagtattgtataaataaa tacgatagtattatgcaatcttctctatcagatccagcagaagctattaagagggaatta cctatggagctcttgcgtgccagtgttcctcacgtaaatgattaccagaaaaagttgcta tatgacctttcccaacgttccttagccagtcaagatggtaatggtggtcacatgaattct gaatctgtgctgagttga

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