Jatropha curcas (Barbados nut): 105646218 Help Entry 105646218         CDS       T03922                                  Name (RefSeq) protein PAT1 homolog isoform X1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism jcu  Jatropha curcas (Barbados nut) Pathway jcu03018   RNA degradation Brite KEGG Orthology (KO) [BR:jcu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     105646218  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:jcu03019]     105646218 Messenger RNA biogenesis [BR:jcu03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      105646218   mRNA degradation factors    5'-3' decay     Decapping complex      105646218 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PAT1 GAGBD Motif Other DBs NCBI-GeneID:  105646218 NCBI-ProteinID:  XP_012087422 UniProt:  A0A067K011 LinkDB All DBs Position Unknown AA seq 779 aa AA seqDB search MEVIESPSGIQEATEGAVFDASQYAFFGKDLVGEVELGGLEDDEEDSPPVEFNEEEFLFV GQEGEVVRSTSDIDDLASRFSKLNKVVSGSTSAGVIGSRGSRASSSAAEWVQGEEFPNWF DQQQLLDYERIQDGKRQSSQPYSYTAHISESMSPYRQSSYPEPQQHHQQLSSEPILVPKS CYTSYHPPGVQSPQASPNHGQLNNAYLGSGPQMTVSLPNLSAISSPQLQFAGLHHGSPNL GGNLSQLSSSLSANGQPPNEWINHTGLCHGDHPNHSNNMLQQQLPHQHGLIPPHLIPQRQ PQQHRLHHVQPSLAHLSGMQSQLINLHPSSPHWTSKFEAVLGPGDIRDQRPKSAQKDRQN LHYSQQGFVNYGRSINGVWSQFRSKYMTADEIENIIRMHLAATHSNDPYVDDYYHQAFLS KKTAGAKLRHHFCPTHLRDLPPRARTSSEPHAFLQVDALGRVPFSSIRRPRPLLEIDPPI SSASAVTDQKVPEKPLEQEPMLAARVTIEDGICCLLDVDDIDRFLEFNQLQDGGVQLKCR RQALLEGLAESLQLVDPFGKDGHAAQLAPTDDIVFLRIVSLPKGRKLLARYLQCLSPGGD LMRIACMAIFRHLRFLFGGLPSDLGAAETVHNLVRVVLLHVRCMDLGSLGSCLAAVVCSS EQPPLRPLGSSAGNGASLVLMCVLDRATELLNKLQDASNYNLTNRALWKASFDEFFSLLV KYCINKLDSIMQSSPDSAEAIKRELPLELLRASIPHTNDYQKKMIYDISPAFLSLSRRC NT seq 2340 nt NT seq  +upstreamnt  +downstreamnt atggaagtgattgaaagtccgagcggtattcaagaggctacagaaggtgctgtgtttgat gcatctcaatatgcgttctttggtaaagatcttgttggggaggttgagctaggcggattg gaggatgatgaagaggactctcctccagttgagtttaatgaggaggagtttctctttgtt ggacaagagggtgaggttgtaagatctacatctgatattgatgatcttgctagcagattt tcaaagttgaacaaggttgtcagtgggtcaactagtgcaggagtaattggtagtagggga tccagagcaagttcatctgctgctgaatgggtgcagggggaggaatttcctaactggttt gatcagcagcagctgcttgactatgaacgcattcaggatggcaaaagacagtcctcacag ccatattcttatactgctcacatttcagaatcaatgtctccgtaccgacaatcgtcttac cctgagccgcaacaacaccatcaacagttatctagtgaacccattcttgtaccaaagtct tgttacacttcatatcatcctcctggtgtacaatctccacaggcttcaccaaatcatggt cagctgaataatgcatatcttggttctggtcctcaaatgacagtatctttaccaaacctc tctgccatttctagtcctcagcttcagtttgcaggcttacatcatggatcacctaactta ggtggaaatttgtcacagctttcatctagtctgtctgcaaatggacagcctccaaacgaa tggattaatcatacaggtctgtgtcatggagatcatcctaaccattctaacaatatgctg cagcagcagctacctcatcaacatggtttaattcccccgcacttgattccacaacggcag ccacagcagcatagactacatcacgttcagccatcattggcccacttgtctgggatgcag tctcaactaattaatcttcacccttcatccccgcactggacgagcaagtttgaagcggtg cttggtccaggtgatattagagatcaaagacctaaatctgctcaaaaagatagacaaaat ctccattattctcagcagggctttgttaactatggtcgaagcattaatggtgtctggtct cagttcagatccaagtacatgacagctgatgaaattgagaacatcatcagaatgcatctt gctgctacacacagtaatgacccatatgtcgatgattattatcaccaggcttttctttcg aaaaaaacagctggtgcaaagcttagacatcatttctgcccaactcacttgagggatctt cctcctcgagcacgcactagctcggagccccatgcttttttgcaggttgatgctcttgga agggttcccttttcttcaattcgtagaccccgtccacttcttgagattgatccgccaatc tcatctgctagtgctgtcactgatcagaaagttcctgagaagcccctagaacaggagcca atgcttgcagctagagtgacaatagaagatggcatttgctgccttcttgatgtggatgat attgaccgttttctagaattcaatcagcttcaagatggaggggtccaattgaaatgcagg aggcaggcattgttggaggggctggcagaatccttgcagttggttgatccatttggcaag gatgggcacgcagctcaactagctccaacggatgacattgtgttcttacgaatagtatct cttcccaagggtaggaaacttctggcgaggtatcttcagtgtctttctccaggtggtgat cttatgcgaattgcttgcatggctatttttcgtcatttgaggtttttgtttggaggtctc ccctctgatctgggagcagcagagactgtacataaccttgtaagagttgtactattacat gtgcgctgcatggatcttggttcacttggctcttgtcttgcagctgtggtttgttcctca gagcagcccccactacgcccccttggaagctctgctggaaatggggcttctcttgtttta atgtgtgttcttgatagagcaactgaactattgaataagcttcaagatgctagcaactat aatttaacaaatcgagcactttggaaggcctcatttgatgagttttttagcctacttgta aagtactgcataaataaattggatagtattatgcagtcttcaccagattcagcagaagcc attaagagagaattacctttggagctcttgcgtgccagtattccccatacaaatgactac cagaaaaagatgatatatgatatttccccagcattccttagtttgtcaaggcggtgttga

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