Jatropha curcas (Barbados nut): 105646857
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Entry
105646857 CDS
T03922
Name
(RefSeq) uncharacterized protein LOC105646857
KO
K14315
nucleoporin NDC1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105646857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105646857
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105646857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
105646857
NCBI-ProteinID:
XP_012088178
UniProt:
A0A067JJW9
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MASPPPPPPEVVVNNRFLGFLIWQSITSSAIFILFKTFVLSPLAKTNTNLSLSLFAFLNF
HLSHLLFSASIFMLSSPQPYSPASPLQLAAAFLRFLFVSGDSFSSHDFRRRANLSLRFLV
FVVATAISGFLSLTCVCAFDRLRSFGFGVGLVYAFFYIFKQRWVLEFPIIQRPPFYSFKM
RFPLAIKQALKLSCTAYLFSAMLLVFVPYQFKSYVTMRKFIGEQINLLFGSFSVFLCWEL
SHNLHQVLHTKRFVFAPPKGSAAAETNPSEPLLAALEESVPGSLPQSLAYLDLSMVCENN
VDTWRRAAFFEETGETYKRVVAVCLRPLEQLPSTLGEGFETNSADKAYQQSNQLQSQSDL
QLDQKYYEPLNNFQQCAWCARAVAALTARSHEEDRFGVAQLSGSNAAVISTLISCLIAVE
SLMGKKTNVQTPHQLMGPAGIKWATLNTGRRDLLVTKKKSGPIHPKAYAMADVLRTSIYS
IVSAFHYEMLASDKAGLLEKDWLICGKPLFGTNELLLQKLRLFLDFRAS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccgccaccgccgccgccggaagtggtggtgaacaatcgatttctagggttt
ctaatatggcaatccataacctcaagtgccatttttatccttttcaaaacttttgttctt
tcacctcttgctaagactaacactaatctttcactatccctctttgctttcctaaatttt
cacttgtcccacttattattctctgcttcaatttttatgctttcatctccacaaccatat
tcgccggcctcgcctctccagctcgccgccgccttcctccgtttcctttttgtctccggc
gattccttctcttcccatgatttccgccgacgcgctaacctttctcttagatttcttgtt
ttcgtggtggcaactgctatttcgggctttctctctttaacatgcgtttgtgcgtttgac
cggcttaggagttttggttttggtgttggattggtatatgctttcttttacatttttaag
cagcgatgggtcttggagtttccaattattcagagaccccctttctacagcttcaagatg
aggtttcctttggctattaaacaagctttaaagctttcttgtacagcttacctgttttca
gcaatgttgctagtatttgtcccatatcagtttaagagttatgtgacaatgcggaagttt
atcggtgagcaaatcaacctattgtttgggagcttttctgtgtttttatgttgggaatta
agtcacaatttacatcaggttctacatacaaagagattcgtatttgctccaccgaaagga
tcagcagcggcggaaacaaatcccagtgagcctctccttgcagctttagaggagagcgtc
ccaggttctcttccacagtctcttgcgtaccttgatctctctatggtttgtgagaataat
gttgatacttggcgacgagctgcattctttgaagaaactggtgagacttacaaaagagtt
gtagctgtatgcttgaggcctctggagcagcttccatctaccctaggtgaaggctttgaa
actaattctgctgataaggcttaccagcaatccaatcaattgcaatcacaatctgatttg
caactagatcaaaagtattatgaaccactgaacaacttccagcaatgtgcatggtgtgca
agagccgttgctgccttaactgcccgttcacatgaggaggataggtttggggttgctcaa
ctgtctggtagcaatgctgcagttatctcaacacttatatcttgcctgattgctgtcgaa
tcactcatggggaagaagacaaatgtgcagacccctcatcagttgatggggccagcaggt
attaaatgggcaactctaaacacaggaagacgagaccttctggtgactaaaaagaaaagt
ggcccaatacatccaaaagcatacgccatggcggatgtgctgaggacttcaatttacagt
attgtatccgcttttcactatgaaatgcttgctagtgacaaagcaggccttcttgaaaag
gattggcttatttgtggcaagcctctttttggtacaaatgagctgctcctacagaaactg
cgccttttcctggattttcgagctagttag
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