Jatropha curcas (Barbados nut): 105646894
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Entry
105646894 CDS
T03922
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105646894
04121 Ubiquitin system [BR:
jcu04121
]
105646894
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
90S particles
Other 90S particles
105646894
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105646894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Sof1
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
eIF2A
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
PROPPIN
Beta-prop_Vps41
Beta-prop_IP5PC_F
VID27
Motif
Other DBs
NCBI-GeneID:
105646894
NCBI-ProteinID:
XP_012088222
UniProt:
A0A067JJL4
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MKVKVISRSTDEFTRERSQDLQRVFHNFDPSLRPQEKAIEYVRALNATKLDKIFARPFIG
AMDGHIDAVSCMAKNPNYLKGIFSGSMDGDIRLWDIASRRTVCQFPGHQGAVRGLTASTD
GRTLISCGTDCTVRLWNVPVASIMESDSTSNSSAEPKAVYVGKNAFWGVDHQWDGELFAT
AGAQVDIWNHNRSQPVNSFEWGTDTVISVRFNPGEPNLLATTASDRSITLYDLRVSTPAR
KLIMLTKTNSIAWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHKDHVSAVMDIDYSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFTCDASYIISGSDDTNLRLWK
TKASEQLGVLLPREKRKHEYHEALKKRYKHLPEVKRIIRHRHLPKPIFKAAALRRTMTEA
SRRKEERRKAHSAPGSIVTKPLRKKRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaaaagtaatatcacgatcaactgacgaattcactcgagaacgaagccaagat
cttcagagagtgtttcacaatttcgaccccagtctacggcctcaagaaaaagctatcgaa
tatgtccgtgcacttaacgccaccaaattggataagatatttgcaaggccatttattgga
gcaatggatggtcatattgatgctgtttcgtgtatggcaaagaatccaaattacttgaaa
gggatattttctggttctatggatggagatattcgcctttgggatattgcttccaggcga
actgtctgtcagtttcctggtcatcaaggtgctgtgcgaggtttgacagcctctacagat
gggcggacgctaatatcctgtggaaccgattgcactgtgaggctttggaatgtcccagtg
gcttccattatggaatcagacagcacctctaacagttcagccgagccaaaggcagtctat
gttgggaagaatgcattttggggtgttgatcaccaatgggatggtgagctctttgccaca
gctggtgctcaagtagatatttggaatcacaataggtctcagccagtgaatagttttgag
tggggaacggacacagttatatctgttcgatttaatcctggggaaccgaaccttttggca
acgactgcaagtgaccgtagcataacattgtatgatttgcgtgtatcaactcctgcaagg
aaacttatcatgctgacaaaaaccaattccattgcatggaacccaatggagccaatgaac
ttcacagctgcaaatgaagattgtaattgctatagttatgatgctagaaaattggatgaa
gctaagtgtgtgcacaaagatcatgtttctgcggtgatggatattgactactctcctact
ggccgagaatttgtaacaggatcttatgatagaactgttaggatcttccagtacaatggc
ggtcatagcagggaaatttatcatacaaaaagaatgcaaagggtattctgtgtcaagttc
acctgtgatgctagttatattatttcagggagtgatgacaccaacctgaggctatggaaa
acgaaagcatcagagcaattgggagtactattgccaagggaaaaaagaaagcatgaatat
catgaagctctcaagaaacgctataagcatcttccagaggtcaaacgtattatcaggcat
agacacttaccaaaacccatattcaaagctgctgccctcagacgcacaatgactgaggct
tcacggaggaaagaagaaagaaggaaggctcatagtgctcctggaagtattgtcactaaa
ccattgcgcaagaagagaatcatcaaagaagttgagtga
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