KEGG   Jatropha curcas (Barbados nut): 105647359
Entry
105647359         CDS       T03922                                 
Name
(RefSeq) phytochrome A
  KO
K12120  phytochrome A
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    105647359
SSDB
Motif
Pfam: PHY PAS PAS_2 GAF HATPase_c PAS_9 HisKA PAS_4 OGG_N
Other DBs
NCBI-GeneID: 105647359
NCBI-ProteinID: XP_012088799
UniProt: A0A067JKI6
LinkDB
Position
Unknown
AA seq 1126 aa
MSTSRPSHSSSSNSTRSRHSARIIAQTTVDAKLHADFEESGSSFDYSNSVRVTGSIAGDQ
PPKSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGD
HPVLGIGTETRTIFTAPSASALEKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFI
IDFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVSELTGYDRV
MTYKFHDDEHGEVISEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVK
VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVIVNEGDEDNDSPTSVQPQ
KRKRLWGLVVCHNTTPRFVPFPLRFACEFLAQVFAIHVNKELELENQIVEKNILRTQTLL
CDMLMRDAPLGIMTQSPNIMDLVKCNGAALLYKNKIWKLGETPSDLQIRDIAVWLSEYHM
DSTGLSTDSLYDAGYPGALTLVDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPG
EKDDGRRMHPRSSFKAFLEVAKTRSLPWKDYEMDAIHSLQLILRNAYKEVETMDMDAKTI
HSRLNDLKIEGMQELEAVTSEMVRLIETAMVPILAVDVNGLLNGWNTKIAELTGLPVDKA
IGKHLLTLVEDSSIDIVKNMLFLALQGKEEQNIQFEIKTHGSKVEGGPISLVVNACASRD
IHENVVGVCFVAQDITGQKTVMDRFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNP
AMTKLTGWKREEVIDKMLLGEVFGINTACCRLKNREAFVNLGIILNNAMTGREPEKVSFS
FFARNGKYVECLLCVNKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKTL
SYIKRQIRNPLSGIIFSRKMMEGTELDAEQKQLLHTSTLCQRQLSKVLDDSDLDSIIESY
LDLEMVAFTLHEVLVSSISQVTLKSKGKGIRITHHDVAEEIMGETFYGDSIRLQQVLADF
LSVSVNYTPTGGQLILAANLTKDQLGQSIHLVHLELRIMHTGGGIPEALLNQMFGSDGDP
CEEGISLLVSRNLVKLMNGDVQYLREAGKSSFLISVELAAGQKSRD
NT seq 3381 nt   +upstreamnt  +downstreamnt
atgtctacctcaaggccaagtcactcctcatccagcaactctacgagatcaagacacagt
gctagaattattgctcagactactgtagatgcaaagctccatgcagattttgaggagtca
ggcagctcatttgactactcgaactcggtgcgtgttaccggttcaattgcaggagatcag
cctccaaagtcagacaaagtaaccacagcctatcttcatcacattcaaaaaggcaagctc
atccagccttttggctgtttgctagccttagatgagaaaactttcaaggttattgcgtat
agtgagaatgctcctgaaatgttgaccatggttagtcatgcagtcccaagtgttggggac
cacccagttctaggaattggaactgaaacaaggactatcttcactgcacccagtgcctct
gccttggagaaagctctgggattcggtgatgtttctcttttgaatccaattttagtccat
tgcaagacttctgggaagcccttttatgctattgtgcatcgggtaactggtagcttcata
attgactttgaaccagtgaaaccttatgaggtgcccatgactgctgctggggccttgcag
tcatacaagcttgcagctaaagcaattgccaggttgcaatctttgccaagtgggagcatg
gaaaggctttgtgatacaatggttcaggaggtctctgagctcactggttatgatagggtg
atgacatataaatttcatgatgatgaacatggggaagttatttctgagattgctaaacca
ggtttagagccatatttgggtctgcattatccagccactgatatccctcaggctgcacgc
tttctatttatgaagaataaggtgcgaatgattgttgattgtcgtgcaaaacatgtcaag
gtgcttcaagatgagaagcttccatttgatctgaccctgtgtggttcaaccctaagggcc
ccacacagttgccatttgcaatatatggagaacatgaactccattgcttcactggttatg
gcagttatagtcaatgagggggatgaagacaatgatagtcctacttctgtgcaaccacag
aaaagaaagagactttggggtttagtagtctgccataatacaactccgagatttgttcca
ttccctctcaggtttgcctgtgaatttctagctcaagtatttgccatccatgtcaacaag
gagttggaattagaaaatcagattgttgaaaagaacatcctgcgtacccagacgctctta
tgtgatatgttgatgcgggatgcacccttgggtattatgacacagagtccaaacataatg
gatcttgtaaagtgtaatggggctgcactattgtacaagaacaagatatggaagttggga
gaaactcctagtgatcttcaaattcgagatatagctgtatggctctcagagtatcatatg
gattctacaggtttgagtacggatagcttgtatgatgcggggtatccaggggctcttact
cttgttgatgtagtttgtggaatggcagctgtgagaataacttccaaggacatgctattt
tggtttcggtcccaaactgctgcagaaattcgatggggtggagcaaaacatgaacctggt
gagaaggatgatggcaggaggatgcacccaaggtcatccttcaaggccttccttgaagtt
gccaagaccaggagtctgccttggaaggactatgaaatggatgcaatccattctctgcag
cttatactgaggaatgcttacaaagaggtagaaaccatggatatggatgccaaaacaatt
cattcaaggcttaatgaccttaaaattgaagggatgcaagaactggaagcagtgactagt
gagatggtccgcttaattgaaacagccatggtgccaattttggcagttgatgtcaatggg
cttcttaatgggtggaataccaaaattgctgagttgactggtcttcctgttgataaagca
atcggaaagcatttgctgacactagtggaagattcttcaattgacatagtaaagaacatg
ttgttcttggcattgcagggcaaggaggagcaaaacatccaatttgagatcaaaacacat
ggctccaaggttgaaggtggccccatcagcttagttgttaatgcttgtgcaagccgggac
attcatgaaaatgttgttggggtgtgttttgtggcccaagatatcacaggccagaagaca
gttatggacaggttcacccgaattgaaggtgattataaagcaattgtacaaaacccaaac
ccattgattcccccaatttttggaaccgatgaatttggttggtgctctgagtggaaccct
gctatgacaaaattgactggatggaagcgagaagaagtaatagataaaatgcttttgggg
gaggtctttgggatcaatacagcttgctgtcgtctcaagaatcgagaagcctttgtaaat
cttggtatcatacttaataatgccatgactggccgagaacctgagaaggtttctttcagt
ttctttgctcggaatggaaagtatgtggagtgcctgttatgtgtgaataagaaattggac
agagagggtgctgttactggggtcttctgcttcctgcagcttgcaagccaagagctacag
caagcacttcatatccagcgattatcagagcaaactgctctgaaaagattgaaaacatta
tcttatataaaaaggcagatcaggaatcctctctccgggattatattttcacggaaaatg
atggagggcactgagttggacgcagaacaaaagcagcttctgcatactagtactctatgt
cagcggcaactcagcaaagttcttgatgactctgatctagatagtatcattgaaagctac
ttagatctagaaatggttgcgtttactctgcacgaagtactagtttcctccatcagccaa
gtcacattgaagagcaagggaaagggtattagaatcacccaccatgatgtagcagaagag
atcatgggtgagactttctatggtgatagcattaggcttcaacaggtattagctgacttc
ctgtcggtatcagttaactatacaccaactggaggccagcttatacttgcagctaacttg
accaaagatcagttagggcaatccattcatctcgtgcacctggaactcaggataatgcat
accggcggcgggatacctgaagcattactgaaccaaatgtttggtagtgatggagatcca
tgtgaggaaggcatcagcctgctcgtcagccgcaacctggtgaagcttatgaatggagat
gtacagtacttgagagaagcaggaaagtccagttttcttatatcagttgaacttgcagca
ggccaaaagtcaagggactaa

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