Jatropha curcas (Barbados nut): 105647359
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Entry
105647359 CDS
T03922
Name
(RefSeq) phytochrome A
KO
K12120
phytochrome A
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105647359
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_9
HisKA
PAS_4
OGG_N
Motif
Other DBs
NCBI-GeneID:
105647359
NCBI-ProteinID:
XP_012088799
UniProt:
A0A067JKI6
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MSTSRPSHSSSSNSTRSRHSARIIAQTTVDAKLHADFEESGSSFDYSNSVRVTGSIAGDQ
PPKSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGD
HPVLGIGTETRTIFTAPSASALEKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFI
IDFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVSELTGYDRV
MTYKFHDDEHGEVISEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVK
VLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVIVNEGDEDNDSPTSVQPQ
KRKRLWGLVVCHNTTPRFVPFPLRFACEFLAQVFAIHVNKELELENQIVEKNILRTQTLL
CDMLMRDAPLGIMTQSPNIMDLVKCNGAALLYKNKIWKLGETPSDLQIRDIAVWLSEYHM
DSTGLSTDSLYDAGYPGALTLVDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPG
EKDDGRRMHPRSSFKAFLEVAKTRSLPWKDYEMDAIHSLQLILRNAYKEVETMDMDAKTI
HSRLNDLKIEGMQELEAVTSEMVRLIETAMVPILAVDVNGLLNGWNTKIAELTGLPVDKA
IGKHLLTLVEDSSIDIVKNMLFLALQGKEEQNIQFEIKTHGSKVEGGPISLVVNACASRD
IHENVVGVCFVAQDITGQKTVMDRFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNP
AMTKLTGWKREEVIDKMLLGEVFGINTACCRLKNREAFVNLGIILNNAMTGREPEKVSFS
FFARNGKYVECLLCVNKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKTL
SYIKRQIRNPLSGIIFSRKMMEGTELDAEQKQLLHTSTLCQRQLSKVLDDSDLDSIIESY
LDLEMVAFTLHEVLVSSISQVTLKSKGKGIRITHHDVAEEIMGETFYGDSIRLQQVLADF
LSVSVNYTPTGGQLILAANLTKDQLGQSIHLVHLELRIMHTGGGIPEALLNQMFGSDGDP
CEEGISLLVSRNLVKLMNGDVQYLREAGKSSFLISVELAAGQKSRD
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctcaaggccaagtcactcctcatccagcaactctacgagatcaagacacagt
gctagaattattgctcagactactgtagatgcaaagctccatgcagattttgaggagtca
ggcagctcatttgactactcgaactcggtgcgtgttaccggttcaattgcaggagatcag
cctccaaagtcagacaaagtaaccacagcctatcttcatcacattcaaaaaggcaagctc
atccagccttttggctgtttgctagccttagatgagaaaactttcaaggttattgcgtat
agtgagaatgctcctgaaatgttgaccatggttagtcatgcagtcccaagtgttggggac
cacccagttctaggaattggaactgaaacaaggactatcttcactgcacccagtgcctct
gccttggagaaagctctgggattcggtgatgtttctcttttgaatccaattttagtccat
tgcaagacttctgggaagcccttttatgctattgtgcatcgggtaactggtagcttcata
attgactttgaaccagtgaaaccttatgaggtgcccatgactgctgctggggccttgcag
tcatacaagcttgcagctaaagcaattgccaggttgcaatctttgccaagtgggagcatg
gaaaggctttgtgatacaatggttcaggaggtctctgagctcactggttatgatagggtg
atgacatataaatttcatgatgatgaacatggggaagttatttctgagattgctaaacca
ggtttagagccatatttgggtctgcattatccagccactgatatccctcaggctgcacgc
tttctatttatgaagaataaggtgcgaatgattgttgattgtcgtgcaaaacatgtcaag
gtgcttcaagatgagaagcttccatttgatctgaccctgtgtggttcaaccctaagggcc
ccacacagttgccatttgcaatatatggagaacatgaactccattgcttcactggttatg
gcagttatagtcaatgagggggatgaagacaatgatagtcctacttctgtgcaaccacag
aaaagaaagagactttggggtttagtagtctgccataatacaactccgagatttgttcca
ttccctctcaggtttgcctgtgaatttctagctcaagtatttgccatccatgtcaacaag
gagttggaattagaaaatcagattgttgaaaagaacatcctgcgtacccagacgctctta
tgtgatatgttgatgcgggatgcacccttgggtattatgacacagagtccaaacataatg
gatcttgtaaagtgtaatggggctgcactattgtacaagaacaagatatggaagttggga
gaaactcctagtgatcttcaaattcgagatatagctgtatggctctcagagtatcatatg
gattctacaggtttgagtacggatagcttgtatgatgcggggtatccaggggctcttact
cttgttgatgtagtttgtggaatggcagctgtgagaataacttccaaggacatgctattt
tggtttcggtcccaaactgctgcagaaattcgatggggtggagcaaaacatgaacctggt
gagaaggatgatggcaggaggatgcacccaaggtcatccttcaaggccttccttgaagtt
gccaagaccaggagtctgccttggaaggactatgaaatggatgcaatccattctctgcag
cttatactgaggaatgcttacaaagaggtagaaaccatggatatggatgccaaaacaatt
cattcaaggcttaatgaccttaaaattgaagggatgcaagaactggaagcagtgactagt
gagatggtccgcttaattgaaacagccatggtgccaattttggcagttgatgtcaatggg
cttcttaatgggtggaataccaaaattgctgagttgactggtcttcctgttgataaagca
atcggaaagcatttgctgacactagtggaagattcttcaattgacatagtaaagaacatg
ttgttcttggcattgcagggcaaggaggagcaaaacatccaatttgagatcaaaacacat
ggctccaaggttgaaggtggccccatcagcttagttgttaatgcttgtgcaagccgggac
attcatgaaaatgttgttggggtgtgttttgtggcccaagatatcacaggccagaagaca
gttatggacaggttcacccgaattgaaggtgattataaagcaattgtacaaaacccaaac
ccattgattcccccaatttttggaaccgatgaatttggttggtgctctgagtggaaccct
gctatgacaaaattgactggatggaagcgagaagaagtaatagataaaatgcttttgggg
gaggtctttgggatcaatacagcttgctgtcgtctcaagaatcgagaagcctttgtaaat
cttggtatcatacttaataatgccatgactggccgagaacctgagaaggtttctttcagt
ttctttgctcggaatggaaagtatgtggagtgcctgttatgtgtgaataagaaattggac
agagagggtgctgttactggggtcttctgcttcctgcagcttgcaagccaagagctacag
caagcacttcatatccagcgattatcagagcaaactgctctgaaaagattgaaaacatta
tcttatataaaaaggcagatcaggaatcctctctccgggattatattttcacggaaaatg
atggagggcactgagttggacgcagaacaaaagcagcttctgcatactagtactctatgt
cagcggcaactcagcaaagttcttgatgactctgatctagatagtatcattgaaagctac
ttagatctagaaatggttgcgtttactctgcacgaagtactagtttcctccatcagccaa
gtcacattgaagagcaagggaaagggtattagaatcacccaccatgatgtagcagaagag
atcatgggtgagactttctatggtgatagcattaggcttcaacaggtattagctgacttc
ctgtcggtatcagttaactatacaccaactggaggccagcttatacttgcagctaacttg
accaaagatcagttagggcaatccattcatctcgtgcacctggaactcaggataatgcat
accggcggcgggatacctgaagcattactgaaccaaatgtttggtagtgatggagatcca
tgtgaggaaggcatcagcctgctcgtcagccgcaacctggtgaagcttatgaatggagat
gtacagtacttgagagaagcaggaaagtccagttttcttatatcagttgaacttgcagca
ggccaaaagtcaagggactaa
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