Jatropha curcas (Barbados nut): 105647763
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Entry
105647763 CDS
T03922
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jcu03000
]
105647763
03036 Chromosome and associated proteins [BR:
jcu03036
]
105647763
Transcription factors [BR:
jcu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
105647763
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105647763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
105647763
NCBI-ProteinID:
XP_012089372
LinkDB
All DBs
Position
Unknown
AA seq
1519 aa
AA seq
DB search
MDEKKEIVEEVKSASGDSFIVDSDDDEPSVSGQDDGMHPDDDDDDEPSESGQDDGIHVEE
PLTEQEIEELVAEFLEVESKAAEAQEALEQESLSKVENDVREELAQMLHRDDLEAAVKDE
MTTFKEEWETVLDELETESAHLLEQLDGAGIELPSLYKWIESQTPNGCHTEAWKRRAHWV
GSHVTSEVTEVVADAEKYLQSHRPVRRRHGKLLEEGASGFLEKKLSTDGSKGEVAENGDV
DWDSLKKLLSGGIGKDVASFGSKYWASVYLANTPHEAAEMGLKFPGVDEVEEIEDIDGSS
SDPFIADAIANEKELLLSEEQRKNYRKVKEEDDARIDQKLQLHLKQRRHRKRSKQVMEGN
VDDLLPLSDISNEKTHEDGGDVSSNPNEFANENSKKDVSESSKNLDVEQPTSNGNSEFSE
PDVIEHRRSKRPNESEEPKIDAKRIRPVIIDSDDEDVGIDKSVSTATKVENESTMPENSG
DFGADGHLSQGVNKEFQCTACNKIALEVHSHPLLKVIICKDCKCLMEEKMHVKLLQDSEC
SECYCGWCGRSNDLVSCKSCKVLFCTTCIKRNIGEDCLSKAQASGWQCCCCLPSQLQRLT
SELEIAMGSGDLMDTSSDSESEDSDADTNIAAISSKRRKKKKIRRILDDAELGEETQKKI
AIEKERQERLKSLKVQFTGKSKVMKSASCNGNLPEGATVEVLGDSATGYIVNVVREKGEE
AVRIPPSISAKLKAHQVAGIRFMWENIVQSIGKVKSGDRGLGCILAHTMGLGKTFQVIAF
LYTAMRSVDLGLRTALIVTPVNVLHNWRQEFMKWRPSEVKPLRVFMLEDVSRERRVELFA
KWRAKGGVFLIGYTAFRNLSFGKNVKDRNMARELCYALQDGPDILVCDEAHMIKNTRADT
TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN
STAYDVKIMNQRSHILYEQLKGFVQRMDMSVVKKDLPPKTVFVITVKLSPLQRKLYKRFL
DVHGFTNDKVSSEKIRKSFFAGYQALAQIWNHPGILQLRKDKDYVSREETVENFNADESS
SDENVDYNTIIGEKPRNAYDFMQGKNDNGFFRKDWWNDLLHGNNYKELDYSGKMVLLLDI
LTMCSLVGDKALVFSQSIPTLDLIEFYLSRLPRHGRKGKFWRKGKDWYRLDGRTESSERQ
RMVEKFNDPENKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQ
KKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQIHRTISREEMLHLFEFGDDENT
DPQIELGQEVRQTDDQNMSCQVGTSLKQNLPLSHGSCSSDKLMERLLGKHHPRWIANYHE
HETLLQENEEEKLTKEEQDMAWEVYRKSLEWEEVQRVSLDESTFDRRPPMPNAVPSVPDP
GNLPTSSMAAPPTPETSCSIVASSKGILRSRTVHRKCTNLSHLLTLRSQGTKVGCTTVCG
ECAQEISWEDLNRDGKMAR
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaaaaggagatagttgaagaggttaaaagtgcttctggtgattcttttatt
gttgattcagatgatgatgagccatctgtatctggacaagatgatggaatgcatcctgat
gatgatgatgatgatgagccatccgaatcgggacaagatgatggaatacatgttgaggaa
cctttaactgagcaagaaatagaagagctagttgctgagttcttagaagttgagagcaag
gctgcagaggctcaagaggcactcgaacaggaatcactttccaaggtggaaaatgatgtg
agagaggagttggcacaaatgcttcaccgtgatgatctggaagcagcagtcaaagatgag
atgactaccttcaaggaggagtgggagacagtgctggatgagctcgagactgaaagtgct
catttgttggagcaacttgatggggctggcatcgagctaccaagcctgtataagtggatt
gaaagtcagactccaaatggttgccatactgaagcttggaaaagaagggcgcactgggta
ggatctcatgtgaccagtgaagttacagaggtagtagctgatgctgagaagtatctccaa
agccacaggcctgtaagaagacggcatgggaaactattggaggaaggtgctagtggattt
ctggagaaaaaactttctacagatggaagcaagggagaggtggctgaaaatggagatgtt
gattgggactctctcaagaaactattatcagggggaattggtaaggatgttgcttcattt
ggtagcaagtattgggcttctgtctacctggccaacactccccatgaagctgcagagatg
gggctcaaatttcctggagtcgatgaggttgaggaaattgaagacatcgatggtagttcc
agtgatccattcattgctgatgccatagcaaacgagaaggaactacttctttccgaggaa
caaagaaaaaattatcgaaaggtcaaagaggaagatgatgcaagaattgatcaaaaactt
cagcttcatttgaagcagaggaggcatcgtaagagatctaaacaggtaatggaaggtaac
gtagatgatctgctgcctctgagtgacatttctaatgagaaaactcatgaagatggggga
gatgtatcgagtaaccctaacgagtttgcaaatgaaaattcgaagaaagatgtgtctgaa
agttctaagaacttggatgtggaacaaccaactagtaatggcaattcagagttttctgaa
cctgatgtcattgaacacagaaggtcgaagcgtccaaatgagagcgaggaaccaaaaatt
gacgctaaaaggattcggcctgttatcatagacagtgatgatgaagatgttgggatagat
aaatcagtttcaactgccactaaagtggagaatgagtcaactatgccagaaaacagtggg
gactttggtgctgatggccatctttcacagggtgtgaacaaggaatttcaatgtactgcc
tgcaataaaattgctttggaagtgcattcgcatccacttttgaaagtaattatttgcaaa
gattgcaaatgtctaatggaggagaagatgcatgtgaagttgttgcaggattctgagtgt
tctgaatgctattgtggatggtgtggacgaagcaatgacttagtaagttgcaagtcatgc
aaagtattattctgtaccacttgtataaaaaggaatattggtgaagactgcttgtctaag
gcacaagcttctggctggcaatgttgttgttgcttacccagtcagctacaaagattgaca
tctgaattggagatagccatgggatcaggagatctaatggatacaagctctgatagtgaa
tcagaggactctgatgcagatacaaacattgctgcaatcagcagtaagaggaggaagaag
aagaagatacggaggattcttgatgatgctgaattaggagaagagacccagaagaaaatt
gcaattgaaaaggagcgtcaagaacgtttgaagtcactgaaagtacagtttactggcaaa
tccaaggtgatgaaatctgcaagctgcaatggaaacttacctgaaggtgctactgttgaa
gtacttggcgattctgccacaggttatatagtgaatgttgtgagggaaaaaggtgaagag
gctgtgaggattcctccaagcatatcagctaaattgaaagcccatcaggtggcagggata
agatttatgtgggagaacattgttcagtcaattgggaaagtaaaatctggagatagaggt
cttggttgcattttagctcatacaatgggcctgggaaaaacttttcaggtcatagctttc
ctgtacactgctatgagaagtgttgatttgggattaagaactgcacttattgttactcct
gtgaatgtgcttcataattggcggcaggagttcatgaagtggaggccttcagaagtcaaa
cccctccgtgtttttatgctggaagatgtatcaagggagagaagagtggagttgtttgca
aaatggagagctaagggtggtgtttttctgattggctacactgcttttcgaaacttatct
tttggaaagaatgtcaaggatcgaaacatggctagggaactttgttatgctttgcaggat
ggacccgatatacttgtttgtgatgaagcccatatgattaagaacaccagagcagataca
actcaagcattgaagcaagtgaaatgccaaaggaggattgcattaacagggtcacctctt
cagaacaatctaatggagtattattgtatggttgattttgtaagagaaggttttcttggt
agcagccatgagtttaggaaccgtttccaaaaccctatagagaatggacaacatactaat
tcaactgcatatgatgtgaaaattatgaatcaaaggtcacatatcctttatgaacaatta
aaaggatttgtgcaaagaatggacatgagtgtggtgaagaaggacctgccacctaaaact
gtctttgtaataactgtaaagctttctcctttgcaaaggaagttatacaagaggttcctc
gatgtgcatggattcacaaatgacaaggtttccagtgaaaagataaggaagagttttttt
gctggataccaggcattagctcagatatggaaccatcctgggattcttcaactcagaaaa
gataaagattacgttagtcgtgaggaaactgttgagaattttaatgcagatgaaagttct
agtgatgaaaatgtagattataatacaattattggagagaagccaaggaatgcttatgat
tttatgcaagggaaaaatgataatggattttttcgaaaggattggtggaatgatcttctt
catggaaataattataaagaacttgattacagtggcaaaatggtattgctgcttgacatt
ttaaccatgtgttctctggtgggtgataaggcattggtttttagccagagcatacccacc
ttagatctcattgaattttatctttcaagattgcctcgacatggaagaaaggggaagttt
tggagaaaaggaaaagactggtacaggctagatggaagaacagagagttctgaaaggcaa
agaatggttgagaagtttaatgatcctgagaataaaagagtcaaatgcactctgatatca
acgagagctggatctctagggattaatcttcatgctgctaaccgtgtagttattgtcgat
ggttcttggaatccaacctatgatcttcaagccatttatcgagcttggaggtatggccaa
aaaaagccagtgtttgcttacagattgatggcacatggaactatggaagaaaaaatctat
aagcgtcaggtgactaaggaggggcttgctgcaagggtagttgatagacaacaaatacat
aggactatttctagagaagaaatgttgcacctctttgaatttggtgatgatgagaatact
gaccctcaaattgagcttggacaagaagttagacaaacagatgaccagaacatgagctgc
caagttggaacttcactgaaacagaatttgcctctttctcatggaagctgctcttctgac
aagttaatggagagattacttggcaagcaccatccgaggtggattgccaattatcatgaa
cacgagactcttttgcaagagaatgaagaggaaaaactgactaaggaggagcaagacatg
gcttgggaagtatataggaaatcattagaatgggaggaagtgcagcgagtttctcttgat
gaatccacatttgatcgaaggccacccatgccaaatgctgttccatctgtacctgatcca
ggcaacctgcctacatcaagcatggctgcccctcctactcctgagacttcctgttccatt
gttgcatcttccaagggcatcttaagaagtcgaacagtgcatcggaaatgcactaatctt
tctcacttgctgactcttagaagtcagggaactaaagtcggctgtactaccgtatgtggg
gaatgtgcccaggagattagctgggaggatcttaacagagatggcaagatggcacgctga
DBGET
integrated database retrieval system
