Jatropha curcas (Barbados nut): 105647779
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Entry
105647779 CDS
T03922
Name
(RefSeq) protein PIR isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105647779
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105647779
Factors involved in mRNA localization
Other mRNA localization factors
105647779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
TPR_5
VHS
GlgX_C
TBD
Motif
Other DBs
NCBI-GeneID:
105647779
NCBI-ProteinID:
XP_037496161
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MAVPIEEAIAALSTFSLEDEQPEVQGPAVLVSSERGATSSPVEYSDVSAYRLSLSEDTKA
LNQLNALIQEGKGMASVLYTYRSCVKALPQLPDSMKHSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERRINGPTITHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSVQWQDIDSMREELDDLQIFLSTRWAILLNLHAEMFRVNNVEDILQVLIV
FAVESLELDFALLFPERHILLRVLPVLVVLATSSEKDSESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAILKELSMYFQKFSSQTRLLTLPAPHELPPREAQDYQRHYLIINHIGAI
RAEHDDFAIRFASAMNQLLLLKSTDGADIEWCKETKGNMYDMVVEGFQLLSRWTARIWEQ
CAWKFSRPCKDAIPSESNGNSATISDYEKVVRYNYTAEERKALVELISCIKNVGSMMHRC
ETLVVDALWETVHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTNKPE
TDLQSQGGENSKGSFFYPRAVPPTTAQVHCLQFLIYEVVSGGNLRKPGGLFGNSGSEIPV
NDLKQLETFFYKLTFFLHILDYSVTIGTLTDLGFLWFREFYLESSRVIQVQKCASVILL
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcagttccaatagaagaagccattgctgccctctccacattctctctggaggatgag
caaccagaggtgcaaggaccagcagttctggtgtcaagtgagaggggagcaaccagtagt
ccagttgagtacagtgatgtttctgcatatcgcttatctttatctgaagacacaaaggca
ctgaatcagctgaatgcacttatccaagaggggaagggcatggcatcggtgctttataca
tatcgcagttgcgtcaaagcactgcctcagctacctgattctatgaaacacagtcaggct
gacttgtatcttgaaacatatcaagttttggacttggagatgagtcgtctgcgtgaaatt
cagcgatggcaagcatctgctgcatctaaactagcagctgatatgcaacgtttttctagg
ccagaacgacgcattaatgggcctacaattactcatttatggtccatgttgaagttactt
gatgttttagtgcaactcgatcatcttaaaaatgctaaagcaagtatacctaatgacttc
tcttggtataagaggacattcacgcaagtcagtgttcagtggcaagacattgattccatg
agggaggagttagatgatttacagattttcttgagcacgaggtgggctatcttgttgaac
ttgcatgctgagatgtttcgtgtgaacaatgtagaagacattctgcaggttctcatagta
tttgctgtagagtcgttggagttagattttgctcttctatttccagagagacacattctt
ctgcgtgttttgcctgttcttgttgtcctagcaacatcatcagagaaagacagcgagtca
ctttacaagagggtgaaaatcaacaggctgatcaatatttttaagaatgatccagtgatt
cctgcttttcctgatctgcatctttctccagcagcaattttgaaagaattgtcaatgtac
tttcagaagttttcctcacagactcgcctcctcacccttccagcacctcatgaacttcca
ccccgggaggcacaagactatcagagacattatctaattatcaatcacataggagctatt
cgtgctgagcatgatgattttgcaattcgttttgcgtcggccatgaatcagttgttgttg
ttgaagtcgacagatggtgctgatatcgagtggtgcaaagaaaccaagggaaacatgtat
gatatggttgttgaaggattccagctattaagcaggtggacagcacgcatttgggaacaa
tgtgcatggaaattttctcgtccatgtaaagatgcaattccttctgaatcaaatggaaat
tctgcaaccatttctgactatgaaaaggtcgtaagatataattacacggctgaggaaagg
aaagcactcgttgaactcattagctgcataaagaatgttggatccatgatgcatcgttgt
gagacattggtagttgacgccttatgggaaactgtacatgctgaggttcaagattttgtc
caaaacacattagccactatgttgcgaactaccttccgaaagaagaaggatctttcaagg
attctttctgatatgcggactctttcagcagactggatggcaaatacaaacaagcctgaa
accgacttacaatcacaaggaggtgaaaatagtaaaggaagcttcttttatcctagagct
gtcccaccaacaactgcacaggtccactgtttgcagttcctgatctatgaagtagtatct
ggtggtaatcttcggaagcccggtggcctgtttggcaatagcgggtctgagattcccgtg
aatgatttaaagcagttggagaccttcttttacaagcttactttcttccttcatatattg
gattactcagtgaccattggaactttgacagatcttggtttcctgtggtttagagaattt
tatttggagtcttctcgcgttattcaggtacagaaatgtgctagcgttattctgctataa
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