Jatropha curcas (Barbados nut): 105647870
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Entry
105647870 CDS
T03922
Name
(RefSeq) uncharacterized protein LOC105647870 isoform X1
KO
K07573
exosome complex component CSL4
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105647870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105647870
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105647870
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
105647870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3082
Flavi_glycop_C
Motif
Other DBs
NCBI-GeneID:
105647870
NCBI-ProteinID:
XP_037496148
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MTSLLLLQRLPVLSSSLNHSLPQNSGHHPSLISVKTRKVLQSKRLTVPLLALTESSDSSQ
SLDESSQSLLQQLTDSFDLPSDYFKQLPRDLRLDLNDAAFDLSNGPVIDECGQELGELLL
NLSRAWELADTSTSRDLASKLPMLESNLTSKAKAAFGKRLVSAGRRFQSMGQYGQGEMQK
VAQAMIRTGKLLSANPIPTTTDEEPKKETRVFKFGELQVAVTAEKANIGAAIAVAFGILS
WELGQGIQSIPESSLQYANDNALLLAKSLRGALLVLFYCSALLSASTSVGLFLLGRELKS
EEK
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacatctcttcttctcctccaacgtcttcccgtactctcttcctctctaaaccattca
cttccgcaaaactcaggccatcatccctctttaatctctgtcaaaaccagaaaagtactc
cagtcgaagcgcctaacagttccactgcttgctctcacggaatcatcagactcttctcag
tctcttgacgaatcctctcaatctcttctccagcagctcactgatagttttgatcttcca
tcggattattttaaacaattacctcgtgatcttcgacttgatttaaatgatgctgctttt
gatctttcaaatggaccagttattgatgagtgtggtcaagagctgggagagctcctgtta
aacctctcccgagcatgggaattggctgacacatcaacttcccgtgatttagctagcaag
ctccctatgttggagagtaatttaacaagcaaggctaaggcagcatttggcaagcgtttg
gtatctgctggaaggaggttccaatcaatgggacagtatggtcagggcgaaatgcagaag
gtagcacaagcaatgattagaactgggaaacttctgtctgcaaatccaataccaacaaca
acagatgaagaaccaaagaaagaaacaagagtcttcaagtttggagaacttcaggttgca
gtcacagctgagaaagccaacattggagctgccattgcagttgcttttgggattctttca
tgggaactaggtcagggcattcaaagcatacctgagagttcattgcagtatgcaaatgac
aatgctttactgctggcgaagtctttaagaggagctctacttgtgctcttttattgttca
gcacttttgtccgcttctacctctgttggactatttttgcttggaagagaactcaagtca
gaggaaaagtga
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