Jatropha curcas (Barbados nut): 105648094
Help
Entry
105648094 CDS
T03922
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X2
KO
K08775
breast cancer 2 susceptibility protein
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03440
Homologous recombination
jcu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105648094
03460 Fanconi anemia pathway
105648094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jcu04121
]
105648094
03036 Chromosome and associated proteins [BR:
jcu03036
]
105648094
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105648094
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105648094
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
105648094
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
105648094
FA (Fanconi anemia) pathway
Downstream FA components
105648094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
105648094
NCBI-ProteinID:
XP_012089778
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MSTWQIFSDTGNNFRWEISGQILPSKPADGPNGAPIQPRNSAHRLPSMTDLLLQECSKLL
ESGEEEDVGHAPMFRTGLGKSVVLKQSSIAKALSVLGNGDGAIGSASVCLTGEKQDSDNV
CGFTNSLFSTGSGKSVNISSAGLVRAKTLLGLENNNVSNFQGFQHPRKSPKVNEQNEWQD
LSYLRMKEDMDNSGMQSVSTPSLIGSKLSNAVTPNLLQSELHNSTPKPPPIKFHTAGGRS
LSVSSDALERAKSLLGDPDLGTFLNEDDAVDPAHTVSKVCRLSDASVMREANFHSAFTYP
CAAKSKHIGKSFVSPLKSSSNQVLSSFNSENIISGISLIKKFDAVDDEKFGGLNNTISSI
QKPLSNGSSGLDMLDDNSSAIGNGLRINTLARSSRGPLVDISNTLGTSCTNHRRVNNEKR
KLGRGTSISQFKRPRSSKFIIPLNKNVSYVLNGLSTSSSENSCCRRTVSTRYPFRTPRMY
IKEYFEVPSSDKNMLEHFTDQVGWIKPEAAEKYKFCDESGVNCIGAEALYHMLVQSGASI
QCVSKEWTMNHYKWIIWKLACYERCYPWKSATRFLTVSNVHEELKYRYEREVNHGHRSAI
KRILEGDSPPSSMMVLCISAICISCKPKIENLALNGDECSNAARMELTDGWYSIDALLDI
PLSKQLSAGKLFVGQKIRIWGARLCGWAGPVSPLEILASRTVSLLLHINGTYRAHWADRL
GFCKGVGPPLAFRCIKNNGGPIPRTLVGVTRIYPILYKEKLRDGGSIVRSERMEARTMQL
YNQRHSAVVEGIVSEYQRKGSHIYNDSDSEEGAKILKILETAAEPEVIMAEMSPEQLNSF
ASYQAKLEATKQLDMDKAIKKALQDAGIQEREVTPFLRVRVVGLTSYHGKAVAKEGLITI
WSPTEKQRNELVEGQAYAIAGLLPVNADSNTLYLQARGSTTKWEPLSPLAIKNFQPFFNP
RVSVLMSNLGEVPLSSEFDIAAYVVYVGEVYTTAQWKKQWVFVTDCSISALWSEELSNSL
LAISFCSPYIDDDSFTPINYNLEGSAVGFFNLIKKAKDQINHLWIAEATENSTYSFSFDS
PICSHLKIAAASAQSWGKTSSLIIDKLKEKVLFIVGDHKG
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagatattctccgacaccggaaataattttcggtgggagatttccggc
caaatcctccctagcaaacctgcagatggacccaacggcgctccgattcaacctcgtaat
tccgctcatcgtcttccttccatgaccgatctactacttcaagagtgttcgaaacttcta
gagagcggcgaagaagaagatgttgggcatgcgccgatgttccgaacaggattagggaag
tcggttgtattgaaacagtcttcgattgctaaagccctgtctgtgcttggcaatggtgat
ggtgccatcggctcagcttcagtgtgcttgacaggtgaaaaacaggattctgataatgta
tgtggattcaccaactccctcttctctactgggtctgggaaatcggttaatatatcttca
gctggtttggtcagagccaagacattattaggcttggaaaacaataatgtctccaatttt
caaggctttcaacatccaaggaaatcacctaaagtaaatgaacaaaatgagtggcaggat
ttatcatatttgaggatgaaagaggatatggacaatagtggaatgcagtcagtttcgaca
ccatctttaattggaagcaagctatcaaatgcagtgactccaaacttgttgcaatctgaa
ctacataattccacgccgaaaccacctccaatcaaattccacactgcaggtggaagatcc
ttatctgtttccagtgatgcattggaacgtgcaaagagtcttcttggtgacccggacttg
ggaactttcttaaatgaggatgatgcagttgatccagctcatacagtttccaaagtatgt
agactcagtgatgcttcagttatgagggaagcaaattttcactctgcttttacttatcca
tgtgctgcaaagagcaagcatattggaaaaagcttcgtatctcctctcaaatcatcttca
aaccaagttctgtcatccttcaattcagaaaatattatttcaggaattagcttgatcaag
aaatttgatgcagtggatgatgaaaagtttggtgggttgaataatactatatcttccatc
cagaagccattaagcaatgggtctagtgggttggatatgttagatgataattcctcagca
attggtaatggactgaggattaacacccttgcaagatcatctcgtgggccattggttgac
atttcaaataccctgggcacctcttgcacaaatcacagacgtgtgaataatgaaaaaagg
aaacttggaaggggaacttctatttctcaattcaagaggccccgcagttccaaattcatc
attcctttgaacaagaatgtttcatacgttctcaatggtttatctacttcatcatctgaa
aattcctgctgcagaagaacagtttctactagatatccttttcggactccaagaatgtat
atcaaggaatactttgaagtgccttcctcagataaaaacatgctggagcacttcacggac
caagtagggtggatcaaaccagaggctgcagagaagtacaaattctgtgatgaatctggt
gtgaactgcattggagcggaagctttataccatatgttggttcaatcaggagcttcgata
caatgtgtttccaaagagtggactatgaatcactacaagtggattatttggaaacttgct
tgttatgagagatgttatccctggaaatctgccacaaggtttttgacagtctccaatgtg
catgaggaactgaaatatagatatgaaagagaagtgaatcatggacaccgttctgcaatt
aagagaattctggaaggagattcaccgccttcttctatgatggttctatgcatttcagct
atctgcatcagttgtaaaccaaaaatagagaacctggcattaaatggggatgaatgtagt
aatgctgcaagaatggaactaacagatggatggtattcaatagatgctcttctggatata
ccactgtcaaagcaactttccgctggaaaactttttgtggggcaaaaaattcgaatatgg
ggagcaagattgtgtggctgggctggccctgtttcaccccttgagattcttgcatcaagg
actgtcagtctgctgttgcatatcaatggaacgtatagagctcattgggctgatcggcta
ggattctgcaagggtgttggtcctcctttggcttttagatgcataaaaaataatggtggt
cccatccctcggactttggttggagtcacgcgaatataccctattctatataaggagaag
ttaagagatggaggatctattgtgagatcagagaggatggaggctagaacaatgcaattg
tacaaccagagacattctgcagttgtggaaggcattgtttccgagtaccaaagaaaaggg
tcccatatttataatgacagtgatagtgaagaaggagctaaaatcttgaagatacttgag
acagcggcagaaccagaagttataatggcagagatgagtccagagcagctaaattcattt
gcttcttaccaagcaaaactagaggcaactaagcaattggacatggataaagcaattaag
aaggctttacaagatgctggcatacaggagagagaagtaacccccttcttgagggttaga
gtggttggtttaactagttatcatggtaaagctgttgcaaaagaaggcttaataacaatt
tggagcccgacagagaaacagcgaaatgagctggttgagggacaggcctatgcaatagca
ggattgttaccagtgaacgctgactcgaatacactttacctgcaagcaagaggatctacg
accaaatgggaacccttgtctcccctagcaatcaaaaacttccagccttttttcaatcct
cgagtatcagtattaatgtcaaatttgggtgaagttcctctttccagtgaatttgatatt
gctgcatatgttgtgtatgtgggagaggtttatacaactgctcagtggaagaaacagtgg
gtttttgttactgattgctccatttctgccttatggtctgaagaattatcaaattcttta
cttgccatcagcttctgctcaccttatatagatgatgattcattcaccccaatcaactat
aatcttgaaggatctgctgttggcttctttaatctcatcaagaaagcaaaggaccaaata
aatcatctctggatagcagaagcaacagaaaattcgacttattctttcagttttgattcc
ccaatttgttctcaccttaaaattgctgctgcttctgctcaaagctgggggaaaacgtct
agcttgattattgacaaactcaaagagaaagttctatttattgttggtgatcataaaggc
tag
DBGET
integrated database retrieval system
