Jatropha curcas (Barbados nut): 105648209
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Entry
105648209 CDS
T03922
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105648209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jcu04121
]
105648209
03036 Chromosome and associated proteins [BR:
jcu03036
]
105648209
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
105648209
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
105648209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
105648209
NCBI-ProteinID:
XP_012089919
UniProt:
A0A067LCP7
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MENSTQESHLRSDYNSITYESLYPIYAMAFSSSPSRSVANHHRIAVGSFIEDYNNRVDVI
SFDTETLSFKTSPTISLDHPYPPTKLMFHPAAASSLRKTSDLLASSGDYLRLWEVRESSV
EPVSVLNNSKTSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIERGAVETQLIAHDKE
VYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT
ILMDSNKVVILDIRSPTMPVAELERHRASVNAIAWAPQSCRHICSVGDDAQALIWDLPTV
AGPNGIDPMSMYSATSEINQLQWSASQPDWIAIAFSNKMQLLKV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggagaactctactcaagaatctcacctcagatccgattacaattccattacctatgaa
tccctttaccctatttacgccatggctttctcctcttctccttcccgctccgtcgccaac
caccaccgtattgctgttggaagtttcatcgaagactacaacaaccgagtcgacgttatt
tctttcgacaccgaaaccctatctttcaagactagccctactatttccctcgaccaccct
taccctccgactaaacttatgttccatcccgctgccgcttcctctctccgtaagacgtcg
gatctccttgcctcgtcaggtgactatctccgactctgggaagttcgggaaagttccgtt
gaacctgtttctgttcttaataatagtaagactagtgaattttgtgctccgttgacttct
tttgattggaatgagattgagcctaagagaattgggacttgtagtattgatacgacctgt
actatttgggatattgaaagaggagctgttgaaacgcagcttattgctcatgataaagag
gtatacgacattgcttggggcgaagcaagggtttttgcgtcggtttctgcagatgggtct
gttagaatttttgatttgagagataaggaacactctacaatcatttatgaaagtccacaa
ccagatacacctctgcttagattggcttggaacaagcaggatttgaggtatatggcaacc
attttgatggatagtaataaagttgtgatcttggatattagatcaccaactatgcctgtt
gcagagttagaaaggcatagagcgagtgttaatgctattgcttgggctccacagagctgt
cggcatatttgctctgttggggatgatgcacaggcactcatttgggacttgcctactgtg
gctgggcctaatgggattgatcccatgtctatgtactctgcaacttctgaaatcaatcag
ttgcaatggtcagcttcccagcctgattggattgctattgcattttcgaacaaaatgcag
cttttaaaagtttga
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