Jatropha curcas (Barbados nut): 105648217
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Entry
105648217 CDS
T03922
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105648217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105648217
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105648217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105648217
NCBI-ProteinID:
XP_012089928
UniProt:
A0A067JFJ6
LinkDB
All DBs
Position
Unknown
AA seq
244 aa
AA seq
DB search
MVEISRDDGRTPNQLRPLACSRNVLHRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEK
ACIEVIWKPKTGQIGKLEKEYEMILKRTLQGICILTINPNTTTSVIIQVVHDDGALLTCA
INAACAALVDAGIPLRHLAVAICCCLAEGGYVILDPTKLEEQKMKGFAYLVFPNSIQSVL
PQGSALVEGEPIEHGILTSVTHGVMSVEEYLKCLDRGRAACAKLSDFFRKVLKVQLPSDS
SKSG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggtggagatcagtagggacgatggacgtacaccaaaccagctgagacctctcgcttgc
tcccgcaacgttctccaccgtgcccatggctcagctagttggtctcaaggagatacaaag
gttttagctgctgtttatggacctaaagctggaacaaagaagaatgagaaccctgagaag
gcatgcattgaagttatttggaagcctaaaactggacagatcggaaaactggaaaaggaa
tatgagatgatactgaaaagaactctgcaaggcatctgcattttgactattaacccaaat
acaacgacatcagttataattcaggttgttcatgatgatggtgctcttctgacatgtgcc
ataaatgcagcatgcgctgcccttgtagatgctggaattcctttgaggcatctagctgtt
gcaatctgttgttgtttggcagaaggtgggtacgttatactggatccaaccaagttggaa
gaacagaaaatgaagggatttgcatatttagtctttccaaactcaattcagtctgttctg
ccacaagggtcagcgttggtggaaggtgaacctattgaacatgggatcctcacctctgtc
acccatggtgtgatgtcagtggaagaatacctcaaatgtctagatcgaggccgtgcagcc
tgtgcaaagttgtctgatttctttaggaaggtattaaaagtacaacttccaagtgactca
tcaaaatccggttga
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