Jatropha curcas (Barbados nut): 105648321
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Entry
105648321 CDS
T03922
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03013
Nucleocytoplasmic transport
jcu03015
mRNA surveillance pathway
jcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105648321
09122 Translation
03013 Nucleocytoplasmic transport
105648321
03015 mRNA surveillance pathway
105648321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105648321
03041 Spliceosome [BR:
jcu03041
]
105648321
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
105648321
Spliceosome [BR:
jcu03041
]
Common components
Common spliceosomal components
Cap binding complex
105648321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G
MIF4G_like_2
TPR_MLP1_2
MAP65_ASE1
Motif
Other DBs
NCBI-GeneID:
105648321
NCBI-ProteinID:
XP_037491219
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MSSWRSLLLRIGDKCSEYGSSSDFKEHIETCFGVIRRELEHSANDILSFILQCAEQLPHK
IPLYGTVVGLLNLENEDFVRKIVENSQTNFQDALDSGNCDKIRVLMRFLTSMMCSKVLQP
TALVVVFETLLSSAATTVDEEKGNPSWQARGDFYVTCILSCLPWGGSELVEQVPEEIERV
MVGIQAYMSIRRHNSDTGLSFFEDDDESEKGATEKDFLEDLWDRIQGLSSNGWKIDSVPR
PHLAFEAQLVAGKCHEFGPINAPEQPEPLVQLSGIIYGKQKHNAELKYPQRIRRLNIFPA
SKTEDMQPIDRFIVEEYLLDVLLFLNGCRKECASYMVGLPVPFRYEYLMAETIFSQLLLL
PTPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFEKIADLDMECRTRLILWFSHHLS
NFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLPPK
GAPNFKYMTEDGKEITEQHALSAELSNKVKGRQTAREIISWVEESVFPHHGLEVTLTVVV
QTLLDIGSKSFTHLITVLERYGQVIARLCHDHDEFWLTHNVSEYLLLRGELSLVLPFQVL
RNAISKTYNRISDLRKEILSLKKSVVSAEEAAAKAKAELDAAESKLTLVDGEPVLGENPV
KMKPLKSKAEKTNEEAISVRDSLEAKAALLARALDENEALFLSLYKNFSNVLMERLPDPS
KAPALRALKSGQVDQMAVDIDETSEMELDNENGRPKKSQSNGEKGSTAYNIGEKEQWCLS
TLGYVKAFSRQYASEIWPHMEKLEVEVFTENAHPLFLKAVYSGLRRPIIEVSSS
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctggagaagtcttcttcttcgaattggcgataaatgctccgagtatggcagc
agttcggactttaaagaacacattgaaacttgttttggtgttattcggcgagaattggag
cactctgcaaatgatattttatctttcattcttcaatgtgctgaacagttacctcacaag
attcctttgtatgggacagtggttggcctactgaatttggaaaatgaagactttgtccgg
aaaatagtggagaattctcaaactaatttccaggatgccttggattctggaaattgcgat
aagattcgagttttgatgcgctttctgacatcaatgatgtgcagtaaagttctccaacca
actgctttggtggttgtgtttgaaaccttattgtcctctgctgctacaacagtggatgag
gagaaaggaaatccctcttggcaagcacgtggagacttttatgtaacatgcattttatcc
tgtcttccatggggaggatcagaactggtcgagcaagttccagaggagattgaaagagtc
atggttggaatacaagcctatatgagcattaggaggcacaattcagacactggcctatct
tttttcgaggatgatgatgaatctgagaaaggtgctaccgaaaaggatttcctggaagat
ttatgggatagaatacagggtttatccagcaatggatggaaaattgatagtgttccaaga
ccccacctagcatttgaagctcagcttgtcgctggaaagtgccatgagtttgggcccatc
aatgctcctgagcaacctgagccacttgtacagctttctgggataatttatggtaaacag
aagcacaatgcagagttgaagtatccacaacgaatacgcaggcttaatatatttcctgca
agtaaaactgaggatatgcaacctatagatcgcttcattgtggaagagtatttattggat
gtgcttttgtttctgaatggctgtcgaaaggaatgtgcttcatacatggttggcctgcct
gtccccttccgatacgagtatcttatggcagagactatattctctcagttacttttgtta
cctacgccaccattcaagccaatatattatacactggttataatggatctttgtaaggct
cttcctggggcttttcctgcagttgtagctggcgcagttcgtgctctttttgagaaaata
gctgatttagatatggaatgtcgcacaaggcttatcctttggttttcacaccatctgtca
aactttcaattcatttggccatgggaagaatgggcttatgttttggaccttccgaagtgg
gcaccacagcgtgtgtttgttcaagaggttttggagagagaagttcgtctatcatactgg
gacaaagttaaacagagcattgagaacgcacctgctttagaggagttgcttccaccaaaa
ggtgctccaaacttcaaatacatgacagaagatggcaaagaaataactgaacagcatgca
ctttctgcagagctcagcaacaaagttaagggaaggcaaactgcccgagaaataatctca
tgggtggaagaaagtgtatttcctcatcatggtttggaagttactcttactgtggtcgtg
caaactcttcttgacattgggtctaaaagtttcacccatctcattactgttttggagaga
tatggtcaagtcattgcccgtctatgtcatgatcacgacgaattttggctcacccacaat
gtttcagaatatttgttactaagaggagagctttcccttgttcttccttttcaggtcctt
aggaatgccatcagcaagacatacaatcggatatctgatttaaggaaagagatcttgtct
cttaagaagagtgttgtatcagcagaggaggctgcagccaaggcaaaagctgagttagat
gctgctgaatcaaagcttactctggtggatggtgaacctgtccttggtgagaaccctgtg
aagatgaagcccttaaaatcaaaggctgaaaaaacaaatgaagaggctatatctgtgcgt
gactcattggaggccaaggcggctcttcttgctcgtgccctggatgaaaatgaggcattg
ttcctctcattgtacaaaaacttctcaaatgtgctgatggaacgcttgccggatccatct
aaagctccagctttgcgggctttgaagtcagggcaggttgatcaaatggctgttgacatt
gatgaaacatcagaaatggaattggacaacgaaaatggaagacccaaaaaaagtcagtct
aatggggaaaagggaagtactgcctataatataggtgaaaaagagcagtggtgtttatca
actctaggctatgtcaaggccttctcaaggcaatatgcttctgagatttggcctcacatg
gagaaattggaagtggaggtattcactgaaaacgcacatcctcttttcttgaaagcagtt
tattccggtttacgtcggcctatcattgaggtgtcatcaagctaa
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