Jatropha curcas (Barbados nut): 105648361
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Entry
105648361 CDS
T03922
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105648361
Transcription machinery [BR:
jcu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
105648361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Response_reg_2
Sigma70_r4_2
Ribosomal_L44
Motif
Other DBs
NCBI-GeneID:
105648361
NCBI-ProteinID:
XP_012090115
UniProt:
A0A067JE81
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MGVVTASSSAARTPLGLNTKFSTYRSTVKRPLIVAFKDDKSNNTALVAPSERIPLPIETP
KGKKRRGKTNNEVLSCALEVDYNEAAAKLENIFKLSPTTDTADVDVSDLSKKGKQKKRKT
REDDGKAGKGANKPIVRNRAKKTKRLDLDTRIALRKNNEEEKITSTIRKKKDTRHENEKI
EELVREYSASTDLVSLDWKKMKIPPVLHSTEHAWLFKLMQPMKALLQVKDHLQTNLGREP
TEGELAEATNMKVEQVRKQLEAGRAARNKLIKHNLRLVLFVINKYFQDFANGPRFQDLCQ
AGVKGLITAIDRFEPKRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAR
LELLIELQRQPTEVEIIERVGISPERYHEVMRASKPIYSLHSRHVVTQEEFINGITDTDG
GDNRRQPALLRLALDDVLDSLKPKESVVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKY
EVKALLKLKHPARVDYLRRYVV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtaactgcttctagctcagctgctaggacaccactaggattgaacacgaaa
ttttcaacatacagatctacagtaaaaagaccattgattgtggcatttaaagacgacaaa
tctaataacacagctctggttgcaccttccgagcgaatcccattgcccatagagacaccc
aaggggaagaaaagacgaggaaaaactaacaatgaagttctttcctgcgccttggaagtg
gattacaatgaagctgctgcaaagcttgaaaatatattcaaacttagcccgacaactgat
actgctgatgtagatgtaagtgacttaagtaagaaaggtaaacaaaagaaaaggaaaact
agggaagatgatggtaaagctgggaaaggagctaacaaacccattgttaggaatcgtgca
aagaaaactaagcggctggaccttgatacaaggattgcattgaggaagaacaacgaagag
gaaaagataacttcaactattaggaagaaaaaggatactcggcatgaaaatgaaaagatt
gaggagcttgtaagggaatattctgcatcaactgatttggtgagcttagactggaagaaa
atgaagatacctccggtgcttcattcaacagagcatgcctggctgttcaagttgatgcaa
cctatgaaggctctccttcaagtgaaagatcatttgcaaactaatttgggaagagaacca
actgagggtgagttagctgaggcgaccaatatgaaagtcgagcaagtaaggaaacagctg
gaagctggacgagctgcaagaaacaagctaattaagcacaatctccgccttgtattgttt
gtaatcaataaatattttcaagactttgcaaatggcccaagatttcaagacctttgccaa
gcaggggttaaggggcttataactgcaattgatcgctttgaacccaaaaggcgatttagg
ctctctacttacagtcttttttggattaggcatgctataataagatcaatgacactctca
agctttacacgtgtctcatttggccttgaatcggttagagcagaaatccagaaagccaga
cttgagttgttgattgagcttcaaagacaaccaaccgaggtagagattattgagagagtg
ggaatttcccctgagagatatcatgaagtaatgagggcctcaaaacccatctactctcta
cattctaggcatgtagttacccaagaagaattcattaatggaatcactgacacagatgga
ggcgataaccggaggcaaccagctcttctgaggcttgctcttgatgatgtgcttgattct
ctaaagcccaaggagagcgtcgtgatcaggcagagatatgggcttgatgggaaaggtgac
agaacactaggagagattgctggaaacttaaatatctcaagagaaatggttaggaagtat
gaagtaaaggcactcttgaagctcaagcatccagctagagtggattatcttcgccgctat
gttgtctga
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