Jatropha curcas (Barbados nut): 105648478
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Entry
105648478 CDS
T03922
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105648478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105648478
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
105648478
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
105648478
NCBI-ProteinID:
XP_012090269
UniProt:
A0A067JEJ3
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MVNSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWKIGECVAIWW
RPNFETIMYPYCPPHITKPKECKKLFLVQLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMITT
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactcatcggtggtgaacacctatcctctgtcgagctatacattcgggaccaaa
gagccaaaaatggagaaagatacttccgtcgctgatcgtctcgctcgcatgaaagtcaac
tatatgaaagagggcatgaggacaagtgttgaagcaattttgctggtacaggagcataat
catcctcatatattactactgcaaattggaaatacattctgcaaactgcctggcggacgt
ctaaagccaggagagaatgaaattgaagggttgaaaagaaaattgaccagcaagcttggt
gctaattcacctgctcttgtgccagactggaagattggtgagtgtgtggccatctggtgg
aggccaaactttgagaccatcatgtatccgtattgccctccccacataacaaagcctaag
gagtgtaagaagcttttccttgttcaattgtctgaaagagagtactttgcagtgcccaaa
aatttaaaacttcttgctgtcccattgtttgaactctatgacaatgtgcagagatatggc
ccagttatatcaaccattcctcaacaactttccagattccagttcaacatgattactaca
tga
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