KEGG   Jatropha curcas (Barbados nut): 105648479
Entry
105648479         CDS       T03922                                 
Name
(RefSeq) WD repeat-containing protein RUP2
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu04120  Ubiquitin mediated proteolysis
jcu04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105648479
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    105648479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:jcu04121]
    105648479
Enzymes [BR:jcu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105648479
Ubiquitin system [BR:jcu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105648479
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     105648479
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_EIPR1 WD40_like Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_NUP159_NUP214 YNR034W-A-like Beta-prop_Vps41 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 105648479
NCBI-ProteinID: XP_012090270
LinkDB
Position
Unknown
AA seq 428 aa
MKIKINETMRSDHLYKAISQQYRKLCEIHGKLSLVQWAMKNFSEKLHNITTLEPPKQEEE
KTKAIKHHKEEEGEEEERARCEWDFNLETVVSSSNSQSVSHALGAIEFDQSENFVATGGI
ARKIRIYSIKSLLPHKGSQYEHILSLDHANACDYYMCTPAKLSSLRWKPGFDSRIIGSGD
YDGVVTEYDLERRLPVFERDEHGGHRVWSVDYSNWNPVVGASGSDDGTMQMWDPRCEDGD
VATIQPSVTRSAVCCVEFNPFGGSMIAIGCADRKAYGYDIRMMVKPVIMLDGHRKTVTYV
KFVDANTLVSASIDGCLKLWNLNESKMIRTYKGHVNNRNFVGLSVWRNGSLLACGSENNR
IFVYDKRWGEPIWMQGFDTAGSSMENQEFVSSVCWRQVGEDKCTLIAGGSDGVLKVFQGK
RKANTTPS
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgaaaataaaaataaatgaaacaatgaggagtgatcatttatacaaagcaattagccag
caatatagaaaactttgcgaaattcatgggaagctttcattggtccaatgggcaatgaaa
aacttctctgaaaaactccataatataactacacttgaaccgccaaaacaagaagaagag
aaaaccaaagccataaagcaccataaagaagaagaaggagaagaagaagaaagagctaga
tgtgagtgggattttaatcttgagacggtagtttcatcaagcaacagccaatctgtatct
cacgcccttggcgctatcgaatttgaccagtctgaaaatttcgttgccacaggtggaata
gcgagaaagataagaatctacagcattaagtctttgctaccgcacaaaggtagtcagtac
gaacacatactttctttagaccatgctaatgcatgtgactactatatgtgtaccccggct
aagcttagcagtctccgatggaaacctggatttgacagccggattatagggtccggagac
tacgacggagtggtgacggaatatgaccttgaaagaagattaccggtatttgaacgagat
gagcacggcggtcatcgggtttggagcgtggactattccaattggaatccggtggtgggc
gcatccggatcggacgatggcaccatgcaaatgtgggacccacgttgtgaggatggagat
gtggctacgattcaacctagcgtgactcgcagtgctgtctgttgtgtggagtttaatccg
tttggtggatcgatgatagccattggatgcgctgaccggaaagcatacggatacgatatt
cgaatgatggtcaaaccggttatcatgctcgatgggcatagaaagactgtgacatacgtt
aagtttgtggacgctaatacattagtgtctgcaagcattgatgggtgcttaaagctatgg
aatttaaacgagtctaaaatgattcgcacgtacaagggacatgtcaataatcggaatttc
gtagggctatcggtgtggaggaatggaagtttattggcttgtggatcagaaaataatcga
atattcgtttatgacaagagatggggagaacccatatggatgcaagggttcgacacagca
ggttcaagtatggaaaaccaggagtttgtcagcagtgtctgctggaggcaagtgggagag
gataagtgcacactaattgcaggtggatcagatggtgtcttaaaagtttttcaaggcaaa
aggaaggcaaatacaactcctagttaa

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