Jatropha curcas (Barbados nut): 105648559
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Entry
105648559 CDS
T03922
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105648559
03036 Chromosome and associated proteins [BR:
jcu03036
]
105648559
Enzymes [BR:
jcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105648559
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
Pre-60S particles
Helicases
105648559
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
105648559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
CMS1
Motif
Other DBs
NCBI-GeneID:
105648559
NCBI-ProteinID:
XP_012090372
UniProt:
A0A067JS50
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MPSIALANNSSDSKDKKERKMKKRIVLQTSLPDSETPGKKKSLMVSDAEEEIFSEKQKKK
EKKKRKAVDTEPEDEEKSETSSELVEPVSLKADKSKKKNKKAKLDEDEEEEGEREVAKAE
DPNATSKFRISLPLREKLKSRGIEALFPIQAMTFNDILDGCDLVGRARTGQGKTLAFVLP
ILESLTNGPAKASRKTGYGRPPSVLVLLPTRELACQVYDDFKVYGEALGLTTCCLYGGAS
YHPQETSLKRGVDVVVGTPGRIKDHIERGNIDLSLLKFRVLDEADEMLRMGFVEDVELIL
GKVEDVSKVQTLLFSATLPDWVKHISTRFLKPSKKTIDLVGNEKMKASTNVRHIVLPCSA
SAISQLIPDIIRCYSSGGRTIIFTEKRESANELAGLLHGARALHGEIQQSQREVTLSGFR
SGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPR
RSNISKIQRESGVKFEHITAPQAADIAKAVGVEAAEKITQVSDSVVPAFMSAAEDLLNNS
GLSAVELLAKALAKTAGYTDIKSRSLLTSMENHVTLLLEAGKPIYTPSFAFGILRRFLPE
DKVESVKGMSLTADGNGAVFDVAASDVDAFLAGQENAANVSLEVLKELPSLQEKDQSRGR
FGGGGRGRGGFNDRSGGNRFSGGRGGRGGGFSDRRNSFGGRGRSNGNRW
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgccatctatagctctggccaataattcatccgattctaaggacaagaaagagaggaag
atgaagaagagaatagttctgcaaacttcattgcctgactctgaaactccaggcaagaag
aagagtttgatggtctctgatgctgaagaggaaatattttcggagaagcagaagaagaaa
gagaagaagaagcgaaaagctgtagataccgagcctgaagatgaagaaaaaagcgagacg
agctcggagctagtagagccggtgagtttgaaggctgataagtcgaagaagaagaataaa
aaggcaaaacttgatgaagatgaggaggaagagggagagagagaagtagctaaggctgag
gatcccaatgcgacttcgaagtttcgaatatcactgcctcttagagagaagcttaaatcc
agagggatagaggcgttgttcccaattcaagccatgaccttcaatgatattcttgatggg
tgtgacttagttgggcgtgcacggactggtcagggtaaaactctggcttttgtactgcct
attttagagtctcttacaaatgggcctgcaaaagcatcgagaaagaccggttatggcagg
ccaccaagcgtgttggttcttctacccaccagagaattagcctgtcaggtgtatgatgac
ttcaaagtttatggcgaggcattgggtttgacaacttgctgtttatatggcggagcttca
taccatcctcaagagacgagcttaaagagaggggtggatgtagttgttggaacaccaggc
cgcataaaggatcacatagagaggggcaatattgacttgagcttactcaagtttcgggtc
cttgatgaggctgatgaaatgttgaggatgggctttgttgaagacgttgaacttattctt
ggaaaagttgaggatgtaagcaaagttcagacgcttctcttcagtgccactttaccagat
tgggtgaaacatatttctactagatttcttaaaccatctaagaaaaccatagatcttgtt
ggcaatgagaaaatgaaggctagtaccaatgtgaggcacattgttctaccctgttctgct
tcagcaatatcgcagcttattccagatataattcgttgttatagcagcggagggcgtaca
attattttcacagagaaaagggaatctgcaaatgagcttgctggtttattgcatggagca
cgggctttacatggggagatacaacagtctcaacgcgaggtcaccctttctgggttcagg
tcaggcaaattcatgacattggtagctacaaatgtggctgctcggggactggatataaat
gatgtgcaattgatcatccagtgtgaacctccgcgtgatgtagaagcttatatacataga
tctggacgcacaggaagagcaggcaatactggagttgctgtaatgctctatgatccaaga
aggtctaatatatcaaaaattcaaagagaatctggtgtaaaatttgagcacattacggcc
cctcaggctgctgatattgcgaaagctgttggtgtagaagcagcggaaaaaataactcaa
gtttctgacagtgtggtccctgcattcatgtctgctgcagaggatctgttgaataactcg
ggtttgtcagctgtagaactacttgcaaaagcccttgccaagactgctggttacaccgac
ataaagagcagatcacttctaacatcgatggagaaccatgttacattactccttgaagct
ggaaaacctatctacacgccatcatttgcttttggtatcttgaggagatttttgcctgag
gacaaggttgagtcagtgaagggtatgtcccttactgctgatggcaacggtgcagtgttt
gatgtggctgcatcagatgtggatgcatttcttgctggtcaggaaaatgctgctaatgtc
agcttagaggtgttaaaagaattgccttccttacaagaaaaagaccaatcaaggggaagg
tttggtggtggaggccgaggacggggtggctttaatgataggagtggtggtaataggttc
tcagggggcagaggtggtaggggtggaggattttctgatagaagaaatagctttggcgga
agaggtcgcagcaatgggaacagatggtga
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