Jatropha curcas (Barbados nut): 105648764
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Entry
105648764 CDS
T03922
Name
(RefSeq) SWI/SNF complex subunit SWI3A isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105648764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105648764
03036 Chromosome and associated proteins [BR:
jcu03036
]
105648764
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105648764
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105648764
PBAF complex
105648764
GBAF(ncBAF) complex
105648764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
105648764
NCBI-ProteinID:
XP_037491635
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MEKTHYDPDPKPTRPDEPELDLYTIPSYSSWFAWDDIHETERAGLKEFFDGSSITRTPKI
YKEYRDFIINKYREDPSRRLTFTEIRKSLVGDVNLLQKVFKFLDKWGLINFGASSASYDD
LEKEETGKIRVEDGPPNGVRVVAMPNSLKPLSVPQSAAGTADVVEDGLKLPPLTSFSDVF
SELGKQKGFVCGNCGESCGSERYESIKQDQYVLCLKCFKDGNYGENKSKDDFKFSDSVDG
SVTHGAVWTEAETLLLLESVLRHGDNWDLVAQDVQTKSKLDCISKLIELPFGDLLLSSTY
KNGNSSGLSRIENSSKQAPLPAAENQATIKNEDSLRDQTNANEQNGDVVDEGPPLKRKRI
GSLSDGGSSLMKQVLIA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaacgcactacgacccggatccaaaaccgacccgaccagatgaaccagagctc
gatctctacaccatccctagctactccagttggtttgcgtgggacgatattcacgagacg
gaaagagccggattgaaagagttctttgatggaagctcaatcacaagaactcccaaaatt
tacaaagaatacagggatttcatcatcaataaataccgcgaagatccgtctagaagactc
actttcacggagatacgcaagtcactggtcggcgacgttaatttgctccagaaggtgttt
aaattcttggacaagtggggattaataaatttcggggcgagttctgctagctatgatgat
ttggagaaagaagaaacgggtaaaattagggttgaggacgggcctccgaatggcgtcagg
gttgtggctatgccgaattccctgaagccgctttcggtgccgcaaagtgcggctggtact
gccgatgttgttgaggatgggctgaaattgcctcctttgacttccttttccgatgtcttc
agtgaattggggaagcaaaaaggatttgtgtgtggtaattgtggtgaaagttgtggttct
gagcgatatgaatctattaagcaggatcaatacgtactttgtctaaaatgtttcaaagat
ggaaactatggagaaaacaagtccaaggatgacttcaagtttagtgacagtgttgatggc
agtgttacacatggagctgtctggactgaggctgagactttacttcttttagaatctgtt
cttaggcatggggacaactgggaccttgttgctcaagatgttcaaaccaagagcaaactt
gactgtatttctaagctcattgagctgccatttggggatctcctgttaagctctacctac
aaaaatggtaactctagtggtttaagtaggattgagaacagctcaaaacaagctccatta
cctgctgctgagaatcaagcgacaataaaaaatgaggattcattgcgtgatcagacaaat
gctaatgagcagaatggagatgttgtggatgaaggtcctccattgaaaagaaaacggatc
ggttctctttcagatggtggtagttctttgatgaaacaggtactcattgcttag
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