Jatropha curcas (Barbados nut): 105648845
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Entry
105648845 CDS
T03922
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1 isoform X1
KO
K28108
shortage in chiasmata 1
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jcu03036
]
105648845
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
105648845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
105648845
NCBI-ProteinID:
XP_012090736
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Position
Unknown
AA seq
1345 aa
AA seq
DB search
MRTRFLNIDYFTSLQSPSETLSFLNLPIPRLPPSRLPNFEEHLFRFDPEPNISPKIGRLP
IEAALSKFISEVTPQKIDVDYGGFEDHQPRNAEVCAGQQWRFSSGTNQVECSKAEAEAFY
EDNEDRIQTAYGCEALEKDNERIVDEHIRRFEFIQFEIPELDEFPEQVCFSEEGMQILSE
VPDIENDPNFLCPGPKVQCFDKVQESLYSVEHVTLEFDMDDKKACMLEDDDSGQEQMNFN
NNSFPLLEVDDVSLRVFTNLSVEDELLTFLENINSKWDQKDNPLIDGIELLSSMQYDVLK
FLSNHCILKQCIESELASMDTDLGMDIISLVENDSANCFFAISPLVFQEFEFLELDSSQI
YGVFFNMQKTDEPVSYDCMYREDKKFKNFNELIASCELAMVDDTFKSMPVPILSDPDKIR
SLHTIFEEILAELKPELLSASDGIYLDWHLLEKDKCSSKIFSFYQNVLEELDSHSIDLDL
ESFNKGKGLIDFVLLHDALDGPKVKEYEESLNMFPEDIMNDQLIGVASRESLDDRSLKSG
IVEHPAIENAEKATLLFKSMSQFNDLDFFLNPGKATGGGKSESAVKAPVTNAISPKEGGY
HSVLSVGENMDGKKLKEMRSFLPTERKHNAQTSEAAGKVEACCMPMAVPNISYAMKPEQT
QGDMLSFPEIIIVVNTQTLDKEMIVSRRSTYQKILAMEKEGLQVVERDLNLPVDVVIMSS
ICLVWYDWKNIRMKATAVDEASSCLPLCIENIATNVLTLLSFTFSCCILVFEGDINFLST
VMETSDGIYAAAASLGVDLQLFCSYSSELTDEIILSNISYAAKLYKGIYPKMPESETLAE
SFLTNFPSVNPLTAHAILSSVGILIEFFEWPNKRRILAVHQYNVPEESITLFSASCSYGE
REDSKSTMTDCSSSVSSGPDSNKCHFNTASEAKLPKCIHSPLKIDICVDDIWQPEPLNQF
PDEVQGPSGVIEHDNSWMSRETAILDDLQWPGPSLKNLFGQKQGSDFAQAEDLSAISKPY
DFKSSKDPVIFDEINNPRLYSDDKFLGQTEGSDMIKKNMLDRNTTSKSESLHQDLLGEVI
DLTDSLGKGVPPITNYMDFSTWLPETEQDTTRKSKAARRLSFDKNGHPTLPTAAAINSGS
DLWSSIPRQGLQQNKNYHDSDMHLNHQKKLLEDILTQRSTGKTKEVPFKEEISHYGGTSL
SKAIHSAHPEPGSPWTIEFLNRIREKSRLRQQSLPCDMSTTEFGYSGNVSKVTKKRSPSI
LEFFKYKGSNNSGKIYEQKKQKQSKQLPSQSKSERTSSSFLPTGTPLEKRSRQTLSFEKN
GSGSQTRLVWTDGSAHRLSKKLRNQ
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcgatttctcaacattgactacttcacctccctccagtctcccagcgaaacc
ctaagtttcctcaatctcccaatccctcgcctccctccttcccgtctccctaacttcgaa
gaacatttgttccggtttgatcccgaaccaaacatctctcctaagatcggaagattgccg
attgaagcggctctctctaagtttatatcagaagttacgcctcaaaaaattgatgttgat
tatggaggtttcgaggatcatcaacctcgaaatgcagaagtttgtgccggtcagcagtgg
aggtttagctctggaactaaccaggtcgaatgctccaaggcagaagccgaggctttttat
gaagacaacgaagataggatccaaacagcatatggatgtgaagctctggagaaagataat
gagaggatcgtagatgaacacatacgcaggtttgagttcatccaatttgaaataccagag
cttgatgaattcccggaacaagtttgcttttctgaagagggcatgcaaattctctcagaa
gttccagacattgagaatgatccaaattttctctgtccggggcctaaagtgcagtgtttt
gacaaggttcaagaatcactttattcagttgaacatgttactttagaatttgacatggac
gacaaaaaggcttgtatgttggaagatgatgattctggtcaagagcaaatgaacttcaat
aataactcgtttcctcttttggaagtggatgatgtaagtctcagagttttcacaaacctg
tctgtagaagatgaacttttgacatttcttgaaaatataaattctaaatgggatcaaaag
gataaccctcttattgatgggatagagttattgagttctatgcaatatgatgtcttgaag
ttcctttcaaaccattgtatattaaagcagtgtattgaatctgagctggcatccatggat
acagacctgggaatggacattataagtttggtggaaaatgactctgcaaattgcttcttt
gcaataagcccacttgtttttcaggaattcgaattccttgaattagactcgtctcaaatt
tacggagtcttctttaacatgcaaaaaacagatgaaccagtatcatatgactgcatgtac
agagaggacaagaagtttaagaatttcaatgaattgattgctagttgtgagctagctatg
gtggatgacacatttaaatcaatgcctgtacctattctttctgaccctgacaagataagg
tcattgcataccatttttgaggaaatactagctgaactaaagccagaacttctttctgca
tctgatgggatttacttggattggcatctattggaaaaagataaatgcagtagtaagatt
ttttccttctatcagaatgtgttggaggagttggattcgcacagcattgatcttgatctg
gaatcttttaataagggtaaggggttgatagattttgttttactgcatgatgctttggac
gggccaaaagtcaaagaatatgaggagtcacttaatatgtttcccgaagacattatgaat
gatcagcttataggagttgcttcaagggagtcgttggatgatagaagcctgaaatcagga
attgtggaacatccagctatagaaaatgctgagaaggcaacattgttattcaaatctatg
tcgcaatttaatgaccttgattttttcttgaatccggggaaagccactggtgggggaaaa
agtgaatccgcagtcaaggcacctgttactaatgctatatctccaaaggaaggaggatat
cattctgtcttatccgtgggtgaaaatatggatggtaagaagttgaaggaaatgcgcagt
tttctgcctactgagcgcaaacataatgcacaaacttcagaagctgcaggtaaagtagaa
gcttgctgtatgcctatggctgttccaaatatatcatacgcaatgaaacctgagcagact
caaggagacatgctgtctttccctgagatcataattgttgtgaatactcaaactcttgac
aaggaaatgatagtgtccagaagaagcacataccaaaaaattcttgcaatggagaaagaa
ggattgcaagttgtagaacgtgatttaaatctgccagtggatgttgtgattatgtcttct
atttgcttggtttggtatgactggaaaaatattagaatgaaggcaactgctgtagatgaa
gcatcttcctgcttgccattgtgtattgagaatattgctacaaatgttttgacattgttg
agtttcactttcagctgctgcattctggtctttgagggagatatcaacttcctgtccact
gtaatggaaacctcagatggaatctacgcagctgcagcaagcctgggagttgatttacag
cttttctgttcctattcatctgagttgactgatgaaattatattgagcaatatttcatat
gcggctaagctttataagggcatatatcctaaaatgcctgaatcagaaacgcttgcagaa
tcattccttaccaattttccttcagtaaatccactgacagcccatgcaatactatcttca
gtaggcatactcattgagttttttgagtggccaaacaagcgcaggatccttgcagtccat
caatataatgttcctgaagaaagtattactttatttagtgcttcatgcagctatggtgaa
agggaggattccaaatctacaatgacagactgctcctcttctgtatcctctggtcccgac
tcgaataagtgtcattttaatactgcttctgaagcaaaactaccaaaatgcatccacagt
cccctaaaaattgacatttgtgtggatgatatatggcagcctgaacccttaaaccagttc
cctgatgaagtacagggtccttctggagtgatagagcatgataattcttggatgtcaaga
gaaactgcgatacttgatgatttgcaatggccgggaccatctttgaaaaatttgtttggt
caaaaacagggatcagattttgcacaggccgaagatttgtctgctatctccaagccatat
gatttcaagagctccaaagatcctgttatatttgatgaaatcaataatccaaggttgtat
tcagatgataaattcttgggtcaaactgagggatcggacatgataaaaaagaacatgttg
gaccggaataccacgagtaaatctgagagtctgcatcaggaccttttaggcgaagttatt
gacctcactgatagtctgggtaagggcgttcctcccattactaactacatggatttttca
acttggctgccagaaacagaacaggacaccacaagaaagtctaaggctgcaagaagattg
tcatttgataaaaacggtcacccaacattacctacagctgctgcaatcaactctggttca
gatttatggtcctctattccaagacaaggtttgcagcaaaacaaaaattatcatgacagt
gatatgcatttaaaccaccagaaaaaactattagaggatattttaacgcagagatctaca
ggaaaaaccaaagaggtgccgttcaaagaggagatatctcattatggtggaacatcactc
tctaaggcaattcattctgcccatccagaaccaggttcgccatggacaatagagtttctc
aatagaatccgggaaaaaagtagattgcggcagcaatcccttccatgcgatatgtcaacc
actgagtttggatactcaggtaatgtatcaaaagttactaagaaaagaagtccatctatt
ctggagtttttcaaatataaagggagcaacaattctggaaaaatttacgaacaaaagaaa
cagaagcagtctaaacaattgccaagccaatccaaaagtgaaagaacttcatcttctttt
cttccaacagggacaccgttggaaaagaggtcaagacaaactttgtccttcgaaaagaat
ggtagtggaagccaaactaggcttgtgtggacagatggaagtgcccaccgtctgagcaaa
aagttgcgaaatcaataa
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