Jatropha curcas (Barbados nut): 105649007
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Entry
105649007 CDS
T03922
Name
(RefSeq) protein SMG9
KO
K18735
protein SMG9
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105649007
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105649007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
AAA_16
ABC_tran
AAA_18
RsgA_GTPase
MeaB
Spore_III_AA
AAA_22
FeoB_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
105649007
NCBI-ProteinID:
XP_012090912
UniProt:
A0A067JD58
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MAGSTSGTGSSNPSPAPPAPKILLAKPGLVTSGPVVGKFGRAGAEDETVSHRSRLPAIGS
LNLLSDSWEFHIDRFLPFLTENTDFTVVGVIGPPGVGKSTIMNELYGFDGSSPGMLPPFT
IQTEDNRAMARHCSVGIEPRISAERLILLDTQPVFSPSILSEMMRPDGSSTISVLSGENL
SAELAHELMAIQLGVLLASICHIVLVVSDGVHDDDMWHLMLTVDLLKHGIPDPSSLTPSH
MQSSNAGPEKENKDKIIEGEEYMATPVFVHTKLHDQDFTPITSMQLKKALALYFSSSSFV
REKGKNKGKEDLSSSVASTTRCNDVHFSPLNLFLIPSNNRDDLPRPQHESFISALWKLRD
EVLSMDCPSFAKTVSERDWLKNSAKIWELVKSSAIIAEYSRTLQNSGMFRR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatctactagcggcaccggttcttccaatccctcaccggctcctcctgctcct
aaaatccttttggcaaagcccggtcttgtcacttctgggccggtggtaggtaaattcggc
cgtgccggtgccgaagatgaaactgtatcgcataggtctcgtctacctgcaatcggctct
ctcaatctcctctctgattcctgggaatttcacattgatcgttttcttccttttctgact
gagaatacagacttcacggtcgttggagtgattgggccgcctggagttggcaaatcaacc
atcatgaatgaactttatggctttgatggaagttcacctggaatgctgccgccatttact
atacagacagaagataacagagcaatggctagacattgcagtgtaggcattgaaccaagg
atatctgctgagaggcttatacttcttgacacccagcctgtttttagcccttctatacta
tctgagatgatgagacctgatggttcgtccactatttcagttttaagtggtgaaaatcta
tctgctgaattggctcatgaacttatggctattcagctcggtgttcttctagcatccatt
tgtcacattgtgctggtggtatcagatggagttcatgatgatgatatgtggcatttaatg
ttgacggttgacctgttgaaacatgggatacctgatccatcttcgttaacaccttcacat
atgcagagctctaacgccgggcctgaaaaagaaaacaaagataaaatcattgaaggtgaa
gaatatatggctactccagtctttgtgcatacgaaattgcatgatcaagattttactcca
attacctcaatgcaactgaagaaggcactcgcactgtacttcagctcatcttcatttgtg
agagagaaaggcaaaaacaagggaaaagaagatctctcgtcttccgtggcttctactact
cggtgtaatgatgttcatttttcacctctgaatttatttttaatcccatctaacaacaga
gatgacttgccaagacctcaacacgagagtttcatctctgcactatggaaactgcgagat
gaggttttatctatggactgcccttcctttgcaaagacggtctcagaacgggactggctg
aaaaattctgcgaagatatgggaactagttaaaagctctgccatcattgctgagtatagc
cgaacacttcaaaattcgggtatgtttaggaggtag
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