Jatropha curcas (Barbados nut): 105649012
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Entry
105649012 CDS
T03922
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04120
Ubiquitin mediated proteolysis
jcu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105649012
04120 Ubiquitin mediated proteolysis
105649012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jcu04121
]
105649012
Enzymes [BR:
jcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105649012
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105649012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
105649012
NCBI-ProteinID:
XP_037491079
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MMRLRTYASLSLFATLAVIYHAFNSRGQFYPAMVYLSTSKINLVLLLNMGLVIMCILWQL
TKRLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLTMVTALLLIKALHWLA
QKRVEYIETTPSVPMLSHIRIVSFLGFLLLLDSLFLYSSVKYLIETRQASVSLFFSFEYM
ILATTTVSTFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG
VPLHLIRELYETFRNFKIRVADYLRYRKITSNMNDRFPDATPEELNASDATCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPDNGASTAGGQHGARSDTHRHGTGT
ASTGAQGSVGNGQDDNLSQHQARLQAAAAAAAVYEKSFVYPSPNTLVWSPGYALLPQAQR
PLADGTNRESSGEQAFMGQSHPHSAIHAGPSNLPQPQFSNYVFVPFRVPGANATHGERLD
TIPNSELEAQKKLLQRQIEVLQTAAPTTTSAKG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgactgcgcacatatgcgagcctaagtttatttgcaactttggcagttatatat
catgcattcaacagtagaggccagttttatccagctatggtttatttatcaacctctaag
atcaatttggtgcttcttcttaacatgggtctagtcattatgtgcattttatggcaatta
actaaacggctattccttggttccctacgggaagctgaggttgaaaggttgaatgagcaa
tcatggagagaggttatggaaatcctctttgccatcactattttcaggcaggacttctca
gtgacatttcttacaatggttacagctttattattaatcaaggcattacattggttagct
caaaagagggttgagtacattgagacaactccatcagttcccatgctgtctcacatacgg
atagtttcatttctggggttccttcttcttctggatagtctgttcttgtacagttctgtt
aagtatttgatagaaacacgtcaggcttcagtctctctcttcttctcctttgagtatatg
atactagcaacaactaccgtctccacttttgtaaaatatgttttctatgtgagtgacatg
cttatggaaggacaatgggaaaggaaggctgtctataccttttatttggaacttattcgc
gacttgcttcacttatcaatgtatctctgcttcttccttgtgattttcatgaattatggt
gtacctttgcacttaatacgagagctttatgagacattcaggaacttcaaaattcgtgtt
gctgattaccttcgttaccggaagatcacttcaaatatgaatgatcggtttcctgatgca
acacctgaagagctcaatgcaagtgatgcaacctgcatcatttgtcgtgaagagatgact
acagccaagaaattaatctgtgggcatctttttcatgttcactgtctccgttcatggttg
gagcgacaacatacttgtcctacatgcagagccctagttgtaccccctgataatggtgcg
agtacagctggagggcaacatggagcacggtcagatactcataggcacggaacaggcacc
gcaagtacaggagcccagggctcagttggcaatgggcaggatgacaatttgagccagcat
caggccaggcttcaagctgctgctgctgctgccgctgtatatgagaaatcttttgtttat
ccttctccaaacacactagtgtggtctcctggatatgccttgctccctcaagctcaaaga
cctttggctgatggtactaatagggaatctagtggagaacaagctttcatgggacaatca
catcctcattctgcaatccatgctgggccatcaaacttgccccagccacaattttccaac
tatgtctttgtaccctttcgggttcctggtgcaaatgcaactcatggagagagattggac
actataccgaactctgagttggaagctcagaaaaagcttctccaacgccaaattgaggtc
ctgcagacggcagctccaactactacatcagcaaaaggctga
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